RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	ARHGAP29	Q52LW3	1261 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	ALF	Q53S48	1182 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	ARMC6	Q6NXE6	501 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	MAEA	Q7L5Y9	396 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	PPP1R32	Q7Z5V6	425 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	MAPKAPK5	Q8IW41	473 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	TMEM132C	Q8N3T6	1108 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	SH2D3C	Q8N5H7	860 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	CAMKK1	Q8N5S9	505 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	SCAMP4	Q969E2	229 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	NACC2	Q96BF6	587 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	PHACTR3	Q96KR7	559 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	DPH1	Q9BZG8	443 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	BHMT2	Q9H2M3	363 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	ARMT1	Q9H993	441 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	ZMAT3	Q9HA38	289 aa	Known RBP	3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	TMEM74B	Q9NUR3	256 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	ETAA1	Q9NY74	926 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	GOLGA6A	Q9NYA3	693 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	CTTNBP2NL	Q9P2B4	639 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	USP25	Q9UHP3	1055 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	FEZ2	Q9UHY8	353 aa	Predicted RBP	3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	TLK1	Q9UKI8	766 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	NOL7	Q9UMY1	257 aa	Known RBP	3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	FPGT-TNNI3K	V9GXZ4	949 aa		3.02	□□□□□ -1.93
PUM3-204	ENST00000490444	FRMPD2	Q68DX3	1309 aa	Predicted RBP	3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	KAT6B	Q8WYB5	2073 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	MYO1F	O00160	1098 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	FRS3	O43559	492 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	RNASEH2A	O75792	299 aa	Known RBP	3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	SPDEF	O95238	335 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	RARB	P10826	455 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	EGR2	P11161	476 aa	Predicted RBP	3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	RHCE	P18577	417 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	ABCG1	P45844	678 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	PHKA1	P46020	1223 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	POU6F2	P78424	691 aa	Predicted RBP	3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	HSD11B2	P80365	405 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	RHD	Q02161	417 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	FGL2	Q14314	439 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	HABP2	Q14520	560 aa	Predicted RBP	3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	CNN3	Q15417	329 aa	Known RBP	3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	CCDC96	Q2M329	555 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	SLC4A8	Q2Y0W8	1093 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	SPDYE7P	Q495Y7	208 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	ANO1	Q5XXA6	986 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	APOA5	Q6Q788	366 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	SRGAP1	Q7Z6B7	1085 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	DAAM2	Q86T65	1068 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	FTSJ3	Q8IY81	847 aa	Known RBP	3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	SMAP1	Q8IYB5	467 aa	Predicted RBP	3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	CPXCR1	Q8N123	301 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	CFAP52	Q8N1V2	620 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	SLC44A3	Q8N4M1	653 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	PDPR	Q8NCN5	879 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	FAM156A	Q8NDB6	213 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	IL31RA	Q8NI17	732 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	IPO4	Q8TEX9	1081 aa	Known RBP	3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	ASB10	Q8WXI3	467 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	ZNF778	Q96MU6	729 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	DUSP26	Q9BV47	211 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	RNPEP	Q9H4A4	650 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	BRD9	Q9H8M2	597 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	KIAA1586	Q9HCI6	787 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	PTPRH	Q9HD43	1115 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	PRDM11	Q9NQV5	511 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	CFAP97	Q9P2B7	532 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	STAP2	Q9UGK3	403 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	TAGLN3	Q9UI15	199 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	HDAC9	Q9UKV0	1011 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	PCDHA6	Q9UN73	950 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	ATP11B	Q9Y2G3	1177 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	MAP3K2	Q9Y2U5	619 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	MED16	Q9Y2X0	877 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	RABGAP1	Q9Y3P9	1069 aa		3.01	□□□□□ -1.93
PUM3-204	ENST00000490444	USP19	O94966	1318 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444		A0A1W2PS29	197 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	CAPN8	A6NHC0	703 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	ZNF785	A8K8V0	405 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	RBMXL2	O75526	392 aa	Known RBP	3	□□□□□ -1.93
PUM3-204	ENST00000490444	CDKL5	O76039	1030 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	SUN1	O94901	812 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	NBPF7	P0C2Y1	421 aa	Predicted RBP	3	□□□□□ -1.93
PUM3-204	ENST00000490444	MPL	P40238	635 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	SOX8	P57073	446 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	PSMC1	P62191	440 aa	Known RBP	3	□□□□□ -1.93
PUM3-204	ENST00000490444	CXADR	P78310	365 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	GPSM2	P81274	684 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	SEMA5A	Q13591	1074 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	BOP1	Q14137	746 aa	Known RBP	3	□□□□□ -1.93
PUM3-204	ENST00000490444	MORC3	Q14149	939 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	CYP2A13	Q16696	494 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	KHDC1L	Q5JSQ8	128 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	TTC30B	Q8N4P2	665 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	ANKRD42	Q8N9B4	389 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	SLC17A8	Q8NDX2	589 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	POC1B	Q8TC44	478 aa		3	□□□□□ -1.93
PUM3-204	ENST00000490444	BRIX1	Q8TDN6	353 aa	Known RBP	3	□□□□□ -1.93
PUM3-204	ENST00000490444	KBTBD7	Q8WVZ9	684 aa		3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms