RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 CCDC192P0DO97 292 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 GAP43P17677 238 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 KCNA4P22459 653 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 GJA4P35212 333 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 RPL10AP62906 217 aaKnown RBP17.05■□□□□ 0.32
PLOD3-216ENST00000489927 MYL7Q01449 175 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 MTF1Q14872 753 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 PDGFRLQ15198 375 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 SV2BQ7L1I2 683 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 OSTM1Q86WC4 334 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 TMEM86AQ8N2M4 240 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 CAMKK1Q8N5S9 505 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 CSGALNACT2Q8N6G5 542 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 LRRC52Q8N7C0 313 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 C12orf50Q8NA57 414 aaPredicted RBP17.05■□□□□ 0.32
PLOD3-216ENST00000489927 TTC16Q8NEE8 873 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 TRMT2BQ96GJ1 504 aaKnown RBP17.05■□□□□ 0.32
PLOD3-216ENST00000489927 MYRFLQ96LU7 910 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 SLC22A12Q96S37 553 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 CYP2S1Q96SQ9 504 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 P2RY13Q9BPV8 354 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 UXTQ9UBK9 157 aaPredicted RBP17.05■□□□□ 0.32
PLOD3-216ENST00000489927 SNX9Q9Y5X1 595 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 OBSL1O75147 1896 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 DENND4CQ5VZ89 1909 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 GOLGA8IPA6NC78 632 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 GOLGA8JA6NMD2 632 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 LDHAP00338 332 aaKnown RBP17.04■□□□□ 0.32
PLOD3-216ENST00000489927 KRT19P08727 400 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 DRD1P21728 446 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 LIMK1P53667 647 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 FAM160A1Q05DH4 1040 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 ZNF77Q15935 545 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 IL31Q6EBC2 164 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 CPA6Q8N4T0 437 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 CACTINQ8WUQ7 758 aaKnown RBP17.04■□□□□ 0.32
PLOD3-216ENST00000489927 OSCP1Q8WVF1 389 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 DDX1Q92499 740 aaKnown RBP17.04■□□□□ 0.32
PLOD3-216ENST00000489927 CLIC6Q96NY7 704 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 HHIPQ96QV1 700 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 CBWD1Q9BRT8 395 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 FGFBP2Q9BYJ0 223 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 ECT2Q9H8V3 914 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 OLFML3Q9NRN5 406 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 DUS2Q9NX74 493 aaKnown RBP17.04■□□□□ 0.32
PLOD3-216ENST00000489927 GDAP2Q9NXN4 497 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 ITGA11Q9UKX5 1188 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 PCDHB13Q9Y5F0 798 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 SRPRBQ9Y5M8 271 aaKnown RBP17.04■□□□□ 0.32
PLOD3-216ENST00000489927 CACNA1BQ00975 2339 aa17.04■□□□□ 0.32
PLOD3-216ENST00000489927 RALGAPA1Q6GYQ0 2036 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 AKAP3O75969 853 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 CKMP06732 381 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 GARTP22102 1010 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 CFAP221Q4G0U5 840 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 PLA2G2CQ5R387 149 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 SPATA2LQ8IUW3 424 aaPredicted RBP17.03■□□□□ 0.32
PLOD3-216ENST00000489927 ADGRF2Q8IZF7 708 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 SYCP3Q8IZU3 236 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 TOP6BLQ8N6T0 577 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 RPLP0P6Q8NHW5 317 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 NOC3LQ8WTT2 800 aaKnown RBP17.03■□□□□ 0.32
PLOD3-216ENST00000489927 EZH1Q92800 747 aaPredicted RBP17.03■□□□□ 0.32
PLOD3-216ENST00000489927 ZC3H10Q96K80 434 aaKnown RBP17.03■□□□□ 0.32
PLOD3-216ENST00000489927 MTMR12Q9C0I1 747 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 SMOC1Q9H4F8 434 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 PCIF1Q9H4Z3 704 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 PDE11AQ9HCR9 933 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 SIX4Q9UIU6 781 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 WNT6Q9Y6F9 365 aa17.03■□□□□ 0.32
PLOD3-216ENST00000489927 LAMA1P25391 3075 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 TRAV19A0A0A6YYK7 116 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 FRMD3A2A2Y4 597 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 GABRDO14764 452 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 TM4SF5O14894 197 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 USP17L7P0C7H9 530 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 IDEP14735 1019 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 TXLNAP40222 546 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 LHX1P48742 406 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 RBP5P82980 135 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 USP4Q13107 963 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 SOWAHAQ2M3V2 549 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 EML3Q32P44 896 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 FBXO43Q4G163 708 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 SYT13Q7L8C5 426 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 SCN4BQ8IWT1 228 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 SPATA18Q8TC71 538 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 CD101Q93033 1021 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 TMEM206Q9H813 350 aa17.02■□□□□ 0.32
PLOD3-216ENST00000489927 CHD8Q9HCK8 2581 aa17.02■□□□□ 0.31
PLOD3-216ENST00000489927 GREB1Q4ZG55 1949 aa17.02■□□□□ 0.31
PLOD3-216ENST00000489927 C2orf78A6NCI8 922 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 ATP2C2O75185 946 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 TMEM191BP0C7N4 346 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 PCSK1P29120 753 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 MPLP40238 635 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 IFNAR2P48551 515 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 CEBPZQ03701 1054 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms