RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 KCTD21Q4G0X4 260 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 DNAL1Q4LDG9 190 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PLEKHG4Q58EX7 1191 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 SPOPLQ6IQ16 392 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 LMBR1LQ6UX01 489 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 LRRC55Q6ZSA7 311 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 MFSD6Q6ZSS7 791 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PIK3AP1Q6ZUJ8 805 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RAPH1Q70E73 1250 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF654Q8IZM8 581 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 SLC7A5P1Q8MH63 180 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CMTR1Q8N1G2 835 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PRELID2Q8N945 189 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF280CQ8ND82 737 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 U2AF1L4Q8WU68 220 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CHPT1Q8WUD6 406 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 USP6NLQ92738 828 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 C18orf8Q96DM3 657 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 MTBPQ96DY7 904 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 AK8Q96MA6 479 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CEP63Q96MT8 703 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CTRCQ99895 268 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 LBHD1Q9BQE6 289 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RTFDC1Q9BY42 306 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 MRPL1Q9BYD6 325 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 GRIP2Q9C0E4 1043 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 KLC2Q9H0B6 622 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 SSU72Q9NP77 194 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 NPHS2Q9NP85 383 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PIH1D3Q9NQM4 214 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 TYW1Q9NV66 732 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 GID8Q9NWU2 228 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RABL2AQ9UBK7 228 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 MTUS1Q9ULD2 1270 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PPM1HQ9ULR3 514 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RAB26Q9ULW5 256 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PLA2G4CQ9UP65 541 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 NEU2Q9Y3R4 380 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 COL4A3BPQ9Y5P4 624 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 NALCNQ8IZF0 1738 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 TTC34A8MYJ7 566 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 FOXO6A8MYZ6 492 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 MIF4GDA9UHW6 222 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 LAD1O00515 517 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 EIF1AYO14602 144 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 MCF2LO15068 1137 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 THAP12O43422 761 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CLASP2O75122 1294 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 AVPP01185 164 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 APOEP02649 317 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 FUCA1P04066 466 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 KCNA2P16389 499 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 HMOX2P30519 316 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 COPB2P35606 906 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 FDFT1P37268 417 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 GSSP48637 474 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ENTPD1P49961 510 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 AQP4P55087 323 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CASP7P55210 303 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RHBDL3P58872 404 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 TUBA1BP68363 451 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 FOXO4P98177 505 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 FKBP3Q00688 224 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 SNAPC2Q13487 334 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 APOFQ13790 326 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 DLGAP5Q15398 846 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PHKG1Q16816 387 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PTPROQ16827 1216 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 TXNRD1Q16881 649 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 AKAP4Q5JQC9 854 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 TMEM63BQ5T3F8 832 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 DCAF12L1Q5VU92 463 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 C1orf146Q5VVC0 180 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RHBDF2Q6PJF5 856 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ELMSAN1Q6PJG2 1045 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CCDC137Q6PK04 289 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 SYDE1Q6ZW31 735 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 TUBA1AQ71U36 451 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 NLRX1Q86UT6 975 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CABP7Q86V35 215 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 TRABD2AQ86V40 505 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 TDRPQ86YL5 185 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RELL1Q8IUW5 271 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CCDC105Q8IYK2 499 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ULK2Q8IYT8 1036 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CRIPAKQ8N1N5 446 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CENPSQ8N2Z9 138 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 LZTR1Q8N653 840 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ABTB2Q8N961 1025 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 KDF1Q8NAX2 398 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 KIAA0895Q8NCT3 520 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PPP4R1Q8TF05 950 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 DDX17Q92841 729 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 SLCO2A1Q92959 643 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 MYO19Q96H55 970 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 STRBPQ96SI9 672 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CYTH2Q99418 400 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 HAUS8Q9BT25 410 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 C1orf21Q9H246 121 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 GANQ9H2C0 597 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms