RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 SMYD5Q6GMV2 418 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 THOC7Q6I9Y2 204 aaKnown RBP10.34□□□□□ -0.75
NOD1-208ENST00000489614 MREGQ8N565 214 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 PDCD7Q8N8D1 485 aaKnown RBP10.34□□□□□ -0.75
NOD1-208ENST00000489614 RBBP8NLQ8NC74 664 aaPredicted RBP10.34□□□□□ -0.75
NOD1-208ENST00000489614 TRAPPC12Q8WVT3 735 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 SLC7A3Q8WY07 619 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 UTP4Q969X6 686 aaKnown RBP10.34□□□□□ -0.75
NOD1-208ENST00000489614 MPP4Q96JB8 637 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 RMDN2Q96LZ7 410 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 GPR88Q9GZN0 384 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 TUT1Q9H6E5 874 aaKnown RBP10.34□□□□□ -0.75
NOD1-208ENST00000489614 NHEJ1Q9H9Q4 299 aaPredicted RBP10.34□□□□□ -0.75
NOD1-208ENST00000489614 AGPAT5Q9NUQ2 364 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 CTTNBP2NLQ9P2B4 639 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 MAGEC2Q9UBF1 373 aaPredicted RBP10.34□□□□□ -0.75
NOD1-208ENST00000489614 RABL2AQ9UBK7 228 aaPredicted RBP10.34□□□□□ -0.75
NOD1-208ENST00000489614 SRRDQ9UH36 339 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 RASAL2Q9UJF2 1139 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 CNTNAP2Q9UHC6 1331 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 CLIC2O15247 247 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 GPR32O75388 356 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 LCA5LO95447 670 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 ASLP04424 464 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 KCNH2Q12809 1159 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 RIBC1Q8N443 379 aaPredicted RBP10.34□□□□□ -0.75
NOD1-208ENST00000489614 TMC2Q8TDI7 906 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 PBKQ96KB5 322 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 ZHX3Q9H4I2 956 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 INTS9Q9NV88 658 aaKnown RBP10.34□□□□□ -0.75
NOD1-208ENST00000489614 FGFR1OP2Q9NVK5 253 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 EXOC7Q9UPT5 735 aa10.34□□□□□ -0.75
NOD1-208ENST00000489614 SART1O43290 800 aaKnown RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 RAD51CO43502 376 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 MYCLP1P12525 358 aaPredicted RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 SKIP12755 728 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 CYLC1P35663 651 aaPredicted RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 HSPA9P38646 679 aaKnown RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 MTTPP55157 894 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 WNT7BP56706 349 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 PHEXP78562 749 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 POU5F1Q01860 360 aaKnown RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 BFSP1Q12934 665 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 GRIK4Q16099 956 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 ASTE1Q2TB18 679 aaPredicted RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 PHLDB3Q6NSJ2 640 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 SCG3Q8WXD2 468 aaKnown RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 PSPC1Q8WXF1 523 aaKnown RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 SYN2Q92777 582 aaPredicted RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 PCMTD1Q96MG8 357 aaPredicted RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 ACO2Q99798 780 aaKnown RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 MLXIPLQ9NP71 852 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 DDX18Q9NVP1 670 aaKnown RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 LRCH1Q9Y2L9 728 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 SEPT4O43236 478 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 PLEKP08567 350 aaPredicted RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 TCP1P17987 556 aaKnown RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 MARK3P27448 753 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 MTIF2P46199 727 aaKnown RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 CPT1AP50416 773 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 MAP7Q14244 749 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 SPA17Q15506 151 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 CFAP221Q4G0U5 840 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 CAPN12Q6ZSI9 719 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.33□□□□□ -0.76
NOD1-208ENST00000489614 FAM186BQ8IYM0 893 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 KIAA0319LQ8IZA0 1049 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 PHF12Q96QT6 1004 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 CLIC5Q9NZA1 410 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 AJAP1Q9UKB5 411 aaPredicted RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 TMA7Q9Y2S6 64 aaKnown RBP10.33□□□□□ -0.76
NOD1-208ENST00000489614 ATP8B3O60423 1300 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 NRCAMQ92823 1304 aa10.33□□□□□ -0.76
NOD1-208ENST00000489614 SMIM35A0A1B0GVV1 85 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 RRN3P2A6NIE6 340 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 SNX3O60493 162 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 KPNA6O60684 536 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 AFPP02771 609 aaKnown RBP10.32□□□□□ -0.76
NOD1-208ENST00000489614 SMIM10L2AP0DMW4 78 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 SMIM10L2BP0DMW5 78 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 PON1P27169 355 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 GTF2H1P32780 548 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 ERFP50548 548 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 EFNA5P52803 228 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 DLG4P78352 724 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 CBWD6Q4V339 395 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 CBWD3Q5JTY5 395 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 CBWD5Q5RIA9 395 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 EFCAB12Q6NXP0 572 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 ZNF662Q6ZS27 426 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 SPATA24Q86W54 205 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 WDR75Q8IWA0 830 aaKnown RBP10.32□□□□□ -0.76
NOD1-208ENST00000489614 XXYLT1Q8NBI6 393 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 C1orf131Q8NDD1 294 aaKnown RBP10.32□□□□□ -0.76
NOD1-208ENST00000489614 DTX3LQ8TDB6 740 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 GLG1Q92896 1179 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 AZIN2Q96A70 460 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 ZNF333Q96JL9 665 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 SYT11Q9BT88 431 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 FAM192AQ9GZU8 254 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms