RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 SLC8A3P57103 927 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 CYP27A1Q02318 531 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 GOLGA8FQ08AF8 430 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 GOLGA8DPQ0D2H9 430 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 PPP1R26Q5T8A7 1209 aaPredicted RBP14.73□□□□□ -0.05
C9orf3-221ENST00000489562 HGSNATQ68CP4 663 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 WDR59Q6PJI9 974 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 RSPO2Q6UXX9 243 aaPredicted RBP14.73□□□□□ -0.05
C9orf3-221ENST00000489562 CYP26C1Q6V0L0 522 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 LRRTM3Q86VH5 581 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 TMTC1Q8IUR5 882 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 SPATA2LQ8IUW3 424 aaPredicted RBP14.73□□□□□ -0.05
C9orf3-221ENST00000489562 C12orf29Q8N999 325 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 AUTS2Q8WXX7 1259 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 TFAP2BQ92481 460 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 DDX1Q92499 740 aaKnown RBP14.73□□□□□ -0.05
C9orf3-221ENST00000489562 MYLPFQ96A32 169 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 MRPL38Q96DV4 380 aaKnown RBP14.73□□□□□ -0.05
C9orf3-221ENST00000489562 SMARCD1Q96GM5 515 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 TMEM209Q96SK2 561 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 AGPAT1Q99943 283 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 MED10Q9BTT4 135 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 PDCL3Q9H2J4 239 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 HAUS4Q9H6D7 363 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 LMCD1Q9NZU5 365 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 AFF4Q9UHB7 1163 aaKnown RBP14.73□□□□□ -0.05
C9orf3-221ENST00000489562 WDR27A2RRH5 827 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 MTMR11A4FU01 709 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 EPOPA6NHQ4 379 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 ABLIM3O94929 683 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 LSM8O95777 96 aaKnown RBP14.72□□□□□ -0.05
C9orf3-221ENST00000489562 OR4Q2P0C623 313 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 FAM200BP0CF97 657 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 CCDC130P13994 396 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 TNFAIP3P21580 790 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 MAGEA11P43364 429 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 BCAT1P54687 386 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 ARPP19P56211 112 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 MAPK8IP2Q13387 824 aaPredicted RBP14.72□□□□□ -0.05
C9orf3-221ENST00000489562 ZNF697Q5TEC3 545 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 GPR153Q6NV75 609 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 PPP1R2P3Q6NXS1 205 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 VSTM1Q6UX27 236 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 FAM35AQ86V20 835 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 FUKQ8N0W3 1084 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 ANKRD52Q8NB46 1076 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 SLC2A14Q8TDB8 520 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 KLHL5Q96PQ7 755 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 BAG1Q99933 345 aaPredicted RBP14.72□□□□□ -0.05
C9orf3-221ENST00000489562 ZSWIM1Q9BR11 485 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 B3GNT5Q9BYG0 378 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 ZNF518BQ9C0D4 1074 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 LHX5Q9H2C1 402 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 DEF6Q9H4E7 631 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 ACP6Q9NPH0 428 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 ARHGAP20Q9P2F6 1191 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 TSPAN16Q9UKR8 245 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 GREB1Q4ZG55 1949 aa14.72□□□□□ -0.05
C9orf3-221ENST00000489562 LAMA2P24043 3122 aaKnown RBP14.72□□□□□ -0.05
C9orf3-221ENST00000489562 CHD9Q3L8U1 2897 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 HIDE1A8MVS5 230 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 M0QYV0 167 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 ADAM12O43184 909 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 SETSIPP0DME0 302 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 SKILP12757 684 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 ATF2P15336 505 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 KLRC2P26717 231 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 ADORA2BP29275 332 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 IRS1P35568 1242 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 FMO1Q01740 532 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 BST2Q10589 180 aaKnown RBP14.71□□□□□ -0.05
C9orf3-221ENST00000489562 GOLGA7BQ2TAP0 167 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 TAF3Q5VWG9 929 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 ELMSAN1Q6PJG2 1045 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 RNF19BQ6ZMZ0 732 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 ZNF571Q7Z3V5 609 aaPredicted RBP14.71□□□□□ -0.05
C9orf3-221ENST00000489562 CCDC170Q8IYT3 715 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 TMEM35BQ8NCS4 154 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 SLC20A1Q8WUM9 679 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 CCDC42Q96M95 316 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 CDCA3Q99618 268 aaPredicted RBP14.71□□□□□ -0.05
C9orf3-221ENST00000489562 SYT11Q9BT88 431 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 TMLHEQ9NVH6 421 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 ABI2Q9NYB9 513 aaPredicted RBP14.71□□□□□ -0.05
C9orf3-221ENST00000489562 DPP7Q9UHL4 492 aa14.71□□□□□ -0.05
C9orf3-221ENST00000489562 ZNF638Q14966 1978 aaKnown RBP14.71□□□□□ -0.06
C9orf3-221ENST00000489562 TRIM66O15016 1216 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 MICAL2O94851 1124 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 GLUD1P00367 558 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 MMEP08473 750 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 NPR3P17342 541 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 CHRNB2P17787 502 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 ELF1P32519 619 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 CDH5P33151 784 aaPredicted RBP14.7□□□□□ -0.06
C9orf3-221ENST00000489562 CYLC1P35663 651 aaPredicted RBP14.7□□□□□ -0.06
C9orf3-221ENST00000489562 EIF4A3P38919 411 aaKnown RBP14.7□□□□□ -0.06
C9orf3-221ENST00000489562 TUFMP49411 452 aaKnown RBP14.7□□□□□ -0.06
C9orf3-221ENST00000489562 ADCY1Q08828 1119 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 CCDC142Q17RM4 750 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 PKDCCQ504Y2 493 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms