RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ZNF268Q14587 947 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-233ENST00000489352 EML3Q32P44 896 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 PKDCCQ504Y2 493 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 TXNDC8Q6A555 127 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 GIPC2Q8TF65 315 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 FAM20AQ96MK3 541 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 MIR1-1HGQ9H1L0 117 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 IL21RQ9HBE5 538 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 HSFX1Q9UBD0 423 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 CYP8B1Q9UNU6 501 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 USP20Q9Y2K6 914 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 PCDHGB2Q9Y5G2 931 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 AHCTF1Q8WYP5 2266 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 CABIN1Q9Y6J0 2220 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 MEI4A8MW99 385 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 MAOBP27338 520 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 FAM160A1Q05DH4 1040 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 MYBPC2Q14324 1141 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 HLA-BQ31612 363 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 C6orf132Q5T0Z8 1188 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 ATF7IP2Q5U623 682 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 EEF1DP3Q658K8 133 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 CDCA2Q69YH5 1023 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-233ENST00000489352 DSTYKQ6XUX3 929 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 MON1AQ86VX9 555 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 TTC9BQ8N6N2 239 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 DEPTORQ8TB45 409 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 ZNF419Q96HQ0 510 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-233ENST00000489352 DRC1Q96MC2 740 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 NRSN2Q9GZP1 204 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 IL21Q9HBE4 155 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 ANKEF1Q9NU02 776 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 CALCOCO1Q9P1Z2 691 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 VAV3Q9UKW4 847 aa12.54□□□□□ -0.4
HDAC6-233ENST00000489352 IGHV1OR15-9A0A0B4J2B8 117 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 ANTXRLA6NF34 631 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 USO1O60763 962 aaKnown RBP12.53□□□□□ -0.4
HDAC6-233ENST00000489352 CKMP06732 381 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 USP17L7P0C7H9 530 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 CDC27P30260 824 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 OPRD1P41143 372 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 NLRP12P59046 1061 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 DMP1Q13316 513 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-233ENST00000489352 OVOS1Q6IE37 1185 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 MOXD1Q6UVY6 613 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 TRMT11Q7Z4G4 463 aaKnown RBP12.53□□□□□ -0.4
HDAC6-233ENST00000489352 CHD1LQ86WJ1 897 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 C18orf25Q96B23 403 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-233ENST00000489352 NAF1Q96HR8 494 aaKnown RBP12.53□□□□□ -0.4
HDAC6-233ENST00000489352 PNKPQ96T60 521 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 CPNE5Q9HCH3 593 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 TRPC7Q9HCX4 862 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 SEPT3Q9UH03 358 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 BRPF3Q9ULD4 1205 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 MAGED2Q9UNF1 606 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-233ENST00000489352 FNDC3AQ9Y2H6 1198 aaKnown RBP12.53□□□□□ -0.4
HDAC6-233ENST00000489352 TMEM131Q92545 1883 aa12.53□□□□□ -0.4
HDAC6-233ENST00000489352 MYOFQ9NZM1 2061 aa12.52□□□□□ -0.4
HDAC6-233ENST00000489352 KLF18A0A0U1RQI7 1052 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 PRPF3O43395 683 aaKnown RBP12.52□□□□□ -0.41
HDAC6-233ENST00000489352 KRT38O76015 456 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 KAT7O95251 611 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 GABRG2P18507 467 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 ATP2B1P20020 1258 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 ADD1P35611 737 aaKnown RBP12.52□□□□□ -0.41
HDAC6-233ENST00000489352 GRM5P41594 1212 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 GRK6P43250 576 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 MYO1EQ12965 1108 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 HDAC1Q13547 482 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-233ENST00000489352 RTP5Q14D33 572 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 SF3A1Q15459 793 aaKnown RBP12.52□□□□□ -0.41
HDAC6-233ENST00000489352 INAVAQ3KP66 663 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 EMC10Q5UCC4 262 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 ALKAL1Q6UXT8 129 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 ZNF248Q8NDW4 579 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 MCPH1Q8NEM0 835 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 RIN3Q8TB24 985 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 YTHDC1Q96MU7 727 aaKnown RBP12.52□□□□□ -0.41
HDAC6-233ENST00000489352 ZMAT2Q96NC0 199 aaKnown RBP12.52□□□□□ -0.41
HDAC6-233ENST00000489352 ACAP3Q96P50 834 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 LINC00597Q9H2U6 94 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 TTC12Q9H892 705 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-233ENST00000489352 ZDHHC4Q9NPG8 344 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 GPRC5CQ9NQ84 441 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 FTSJ1Q9UET6 329 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 ANK1P16157 1881 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 LRRK2Q5S007 2527 aa12.52□□□□□ -0.41
HDAC6-233ENST00000489352 UTP20O75691 2785 aaKnown RBP12.52□□□□□ -0.41
HDAC6-233ENST00000489352 KNL1Q8NG31 2342 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 TRAV19A0A0A6YYK7 116 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 M0QZQ0 153 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 SLC37A4O43826 429 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 SLITRK3O94933 977 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 BAG4O95429 457 aaKnown RBP12.51□□□□□ -0.41
HDAC6-233ENST00000489352 LARGE1O95461 756 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 F11P03951 625 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 CDK4P11802 303 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 KRT10P13645 584 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 KCNE1P15382 129 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms