RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 WDTC1Q8N5D0 677 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 LRRC57Q8N9N7 239 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 ANKRD52Q8NB46 1076 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 C3orf20Q8ND61 904 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 C18orf8Q96DM3 657 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 VWCEQ96DN2 955 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 CPXM1Q96SM3 734 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 HNRNPABQ99729 332 aaKnown RBP10.59□□□□□ -0.71
USP11-211ENST00000489111 LPIN3Q9BQK8 851 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 HTATIP2Q9BUP3 242 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 KRT82Q9NSB4 513 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 WDR35Q9P2L0 1181 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 LCMT1Q9UIC8 334 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 ANAPC7Q9UJX3 599 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 AMFRQ9UKV5 643 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 COG5Q9UP83 839 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 HYOU1Q9Y4L1 999 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 DNAH12Q6ZR08 3092 aa10.59□□□□□ -0.71
USP11-211ENST00000489111 CARNS1A5YM72 827 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 MYO1FO00160 1098 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 NCK2O43639 380 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 SPOPO43791 374 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 ATP2C2O75185 946 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 FGBP02675 491 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 TCP1P17987 556 aaKnown RBP10.58□□□□□ -0.72
USP11-211ENST00000489111 TKTP29401 623 aaKnown RBP10.58□□□□□ -0.72
USP11-211ENST00000489111 ALDH7A1P49419 539 aaKnown RBP10.58□□□□□ -0.72
USP11-211ENST00000489111 RGS7P49802 495 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 DNA2P51530 1060 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 DEFB103AP81534 67 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 PDE4CQ08493 712 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 MAMLD1Q13495 774 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 MESDQ14696 234 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 RPS6KA1Q15418 735 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 INTS6LQ5JSJ4 861 aaKnown RBP10.58□□□□□ -0.72
USP11-211ENST00000489111 PAPD7Q5XG87 772 aaKnown RBP10.58□□□□□ -0.72
USP11-211ENST00000489111 PLEKHA7Q6IQ23 1121 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 ZNF280DQ6N043 979 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 PSRC1Q6PGN9 363 aaPredicted RBP10.58□□□□□ -0.72
USP11-211ENST00000489111 OTOP2Q7RTS6 562 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 FAM35AQ86V20 835 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 MYCBPAPQ8TBZ2 947 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 STK32AQ8WU08 396 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 BADQ92934 168 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 TOP1MTQ969P6 601 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 MCEEQ96PE7 176 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 YME1L1Q96TA2 773 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 ACBD6Q9BR61 282 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 SELENOOQ9BVL4 669 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 GOLPH3Q9H4A6 298 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 CRTAC1Q9NQ79 661 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 HCSTQ9UBK5 93 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 CYTH4Q9UIA0 394 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 SNX12Q9UMY4 172 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 SAR1BQ9Y6B6 198 aa10.58□□□□□ -0.72
USP11-211ENST00000489111 E5RJQ4 531 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
USP11-211ENST00000489111 XPO1O14980 1071 aaKnown RBP10.57□□□□□ -0.72
USP11-211ENST00000489111 AP1G2O75843 785 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 ERBB2P04626 1255 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 GALTP07902 379 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 NPR3P17342 541 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 LAG3P18627 525 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 PBX3P40426 434 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 ACADSBP45954 432 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 GABRB2P47870 512 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 AMPD2Q01433 879 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 PLCB3Q01970 1234 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 BTG3Q14201 252 aaPredicted RBP10.57□□□□□ -0.72
USP11-211ENST00000489111 ZNF268Q14587 947 aaPredicted RBP10.57□□□□□ -0.72
USP11-211ENST00000489111 PTPROQ16827 1216 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 CCDC142Q17RM4 750 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 WHAMMP3Q1A5X7 153 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 PKDCCQ504Y2 493 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 FAM102AQ5T9C2 384 aaPredicted RBP10.57□□□□□ -0.72
USP11-211ENST00000489111 MEI1Q5TIA1 1274 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 FAM171A1Q5VUB5 890 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 OR6B2Q6IFH4 312 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 LLGL2Q6P1M3 1020 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 FUT10Q6P4F1 479 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 C4orf50Q6ZRC1 276 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 SLFN11Q7Z7L1 901 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 CEP57Q86XR8 500 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 XYLT1Q86Y38 959 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 CMTR2Q8IYT2 770 aaKnown RBP10.57□□□□□ -0.72
USP11-211ENST00000489111 DCP1BQ8IZD4 617 aaKnown RBP10.57□□□□□ -0.72
USP11-211ENST00000489111 FUKQ8N0W3 1084 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 UBL4BQ8N7F7 174 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 MNS1Q8NEH6 495 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 FEZF2Q8TBJ5 459 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 UBE2Q2Q8WVN8 375 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 MYLPFQ96A32 169 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 SMARCD1Q96GM5 515 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 ZNF558Q96NG5 402 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 LBHD1Q9BQE6 289 aaPredicted RBP10.57□□□□□ -0.72
USP11-211ENST00000489111 TLR10Q9BXR5 811 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 DUSP16Q9BY84 665 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 B3GNT5Q9BYG0 378 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 L2HGDHQ9H9P8 463 aa10.57□□□□□ -0.72
USP11-211ENST00000489111 CYLDQ9NQC7 956 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms