RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 LMO7Q8WWI1 1683 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 TRPM3Q9HCF6 1732 aaPredicted RBP3.37□□□□□ -1.87
CALD1-221ENST00000489019 PNMA6EA0A0J9YXQ4 647 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 A0A1B0GTW7 788 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 SHTN1A0MZ66 631 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 ALG1L2C9J202 215 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 ERC2O15083 957 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 TEX33O43247 280 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 ALDH1L1O75891 902 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 SBK3P0C264 359 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 SPATA31D3P0C874 917 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 MYL6BP14649 208 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 PHKG2P15735 406 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 MX1P20591 662 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 FGFR4P22455 802 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 DDX6P26196 483 aaKnown RBP eCLIP3.37□□□□□ -1.87
CALD1-221ENST00000489019 PDE1AP54750 535 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 NOMO3P69849 1222 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 SLC39A6Q13433 755 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 RABEP1Q15276 862 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 PTPN21Q16825 1174 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 NOMO2Q5JPE7 1267 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 DACT2Q5SW24 774 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 BEND3Q5T5X7 828 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 KSR2Q6VAB6 950 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 SPATA31D4Q6ZUB0 917 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 MIGA2Q7L4E1 593 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 PPP1R42Q7Z4L9 355 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 RAVER1Q8IY67 606 aaKnown RBP3.37□□□□□ -1.87
CALD1-221ENST00000489019 CNTROBQ8N137 903 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 TMEM132CQ8N3T6 1108 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 IFI44Q8TCB0 444 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 OTUD7AQ8TE49 926 aaPredicted RBP3.37□□□□□ -1.87
CALD1-221ENST00000489019 ASB10Q8WXI3 467 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 SNX21Q969T3 373 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 KIF1BPQ96EK5 621 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 DMRTA2Q96SC8 542 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 SMAD5Q99717 465 aaKnown RBP3.37□□□□□ -1.87
CALD1-221ENST00000489019 USP44Q9H0E7 712 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 GSTO2Q9H4Y5 243 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 IL1RAPL2Q9NP60 686 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 PRDM11Q9NQV5 511 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 SYBUQ9NX95 663 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 C11orf21Q9P2W6 132 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 USP25Q9UHP3 1055 aa3.37□□□□□ -1.87
CALD1-221ENST00000489019 PHRF1Q9P1Y6 1649 aaKnown RBP3.37□□□□□ -1.87
CALD1-221ENST00000489019 OVOS2A0A0G2JMS6 1433 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 PXDNQ92626 1479 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 KDM3BQ7LBC6 1761 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 RGPD5Q99666 1765 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 PIPSLA2A3N6 862 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 CDHR4A6H8M9 788 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 CCDC154A6NI56 674 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 KIAA0391O15091 583 aaKnown RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 B3GALT2O43825 422 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 CDKL5O76039 1030 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 ZFPL1O95159 310 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 ZRANB2O95218 330 aaKnown RBP eCLIP3.36□□□□□ -1.87
CALD1-221ENST00000489019 IFIT2P09913 472 aaKnown RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 NBPF7P0C2Y1 421 aaPredicted RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 EGR2P11161 476 aaPredicted RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 PTMSP20962 102 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 ZNF280AP59817 542 aaPredicted RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 CTXN1P60606 82 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 HSD11B2P80365 405 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 PURAQ00577 322 aaKnown RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 CDC42EP1Q00587 391 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 GUCY1B3Q02153 619 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 KIF23Q02241 960 aaPredicted RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 G3BP1Q13283 466 aaKnown RBP eCLIP3.36□□□□□ -1.87
CALD1-221ENST00000489019 BRDTQ58F21 947 aaPredicted RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 HECTD2Q5U5R9 776 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 ZNF790Q6PG37 636 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 ERC1Q8IUD2 1116 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 WDR75Q8IWA0 830 aaKnown RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 CMTR2Q8IYT2 770 aaKnown RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 CLASRPQ8N2M8 674 aaKnown RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 SSH3Q8TE77 659 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 KAT5Q92993 513 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 HDAC10Q969S8 669 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 NACC2Q96BF6 587 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 MARS2Q96GW9 593 aaKnown RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 TMX3Q96JJ7 454 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 MRGPRX4Q96LA9 322 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 MYD88Q99836 296 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 SLC13A1Q9BZW2 595 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 C11orf54Q9H0W9 315 aaPredicted RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 DDX21Q9NR30 783 aaKnown RBP eCLIP3.36□□□□□ -1.87
CALD1-221ENST00000489019 TDP1Q9NUW8 608 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 TYW1Q9NV66 732 aaKnown RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 VSX1Q9NZR4 365 aaPredicted RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 HSFX1Q9UBD0 423 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 TCEAL9Q9UHQ7 104 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 SAP30BPQ9UHR5 308 aaKnown RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 PACSIN3Q9UKS6 424 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 THRAP3Q9Y2W1 955 aaKnown RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 PCDHB1Q9Y5F3 818 aa3.36□□□□□ -1.87
CALD1-221ENST00000489019 EPN1Q9Y6I3 576 aaPredicted RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 MED1Q15648 1581 aaPredicted RBP3.36□□□□□ -1.87
CALD1-221ENST00000489019 AOX1Q06278 1338 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms