RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 ZIM3Q96PE6 472 aa7.01□□□□□ -1.29
HDLBP-243ENST00000488923 FDXACB1Q9BRP7 624 aaPredicted RBP7.01□□□□□ -1.29
HDLBP-243ENST00000488923 C11orf70Q9BRQ4 267 aa7.01□□□□□ -1.29
HDLBP-243ENST00000488923 XYLT2Q9H1B5 865 aa7.01□□□□□ -1.29
HDLBP-243ENST00000488923 PDZD7Q9H5P4 517 aa7.01□□□□□ -1.29
HDLBP-243ENST00000488923 ACP6Q9NPH0 428 aa7.01□□□□□ -1.29
HDLBP-243ENST00000488923 PRDM10Q9NQV6 1147 aa7.01□□□□□ -1.29
HDLBP-243ENST00000488923 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.01□□□□□ -1.29
HDLBP-243ENST00000488923 ST7Q9NRC1 585 aa7.01□□□□□ -1.29
HDLBP-243ENST00000488923 WHRNQ9P202 907 aa7.01□□□□□ -1.29
HDLBP-243ENST00000488923 ZHX1Q9UKY1 873 aaPredicted RBP7.01□□□□□ -1.29
HDLBP-243ENST00000488923 ZNF236Q9UL36 1845 aa7.01□□□□□ -1.29
HDLBP-243ENST00000488923 POLR2AP24928 1970 aaKnown RBP7□□□□□ -1.29
HDLBP-243ENST00000488923 ZSCAN5CA6NGD5 496 aaPredicted RBP7□□□□□ -1.29
HDLBP-243ENST00000488923 LACTBL1A8MY62 500 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 GPR25O00155 361 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 B4GALT5O43286 388 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 TSPAN1O60635 241 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 CD4P01730 458 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 ITGB3P05106 788 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 KRT19P08727 400 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 KRT7P08729 469 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 NUDT17P0C025 328 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 FAM153BP0C7A2 387 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 CXCL8P10145 99 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 RARAP10276 462 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 ARF4P18085 180 aaPredicted RBP7□□□□□ -1.29
HDLBP-243ENST00000488923 ECHS1P30084 290 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 HSD17B3P37058 310 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 GUCY2FP51841 1108 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 IFFO1Q0D2I5 559 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 ZNF268Q14587 947 aaPredicted RBP7□□□□□ -1.29
HDLBP-243ENST00000488923 CNGA2Q16280 664 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 PTPROQ16827 1216 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 WDR72Q3MJ13 1102 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 FAM153CQ494X1 144 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 RNFT1Q5M7Z0 435 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 EEF1DP3Q658K8 133 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 DENND2CQ68D51 928 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 DESI1Q6ICB0 168 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 NOTUMQ6P988 496 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 SLC27A1Q6PCB7 646 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 DRICH1Q6PGQ1 229 aaPredicted RBP7□□□□□ -1.29
HDLBP-243ENST00000488923 MMS22LQ6ZRQ5 1243 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 ZNF365Q70YC5 407 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 TRMT10CQ7L0Y3 403 aaKnown RBP7□□□□□ -1.29
HDLBP-243ENST00000488923 TMC3Q7Z5M5 1100 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 CCDC50Q8IVM0 306 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 LRRC52Q8N7C0 313 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 C1orf127Q8N9H9 656 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 TSEN2Q8NCE0 465 aaKnown RBP7□□□□□ -1.29
HDLBP-243ENST00000488923 BEST2Q8NFU1 509 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 TRAPPC12Q8WVT3 735 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 C18orf8Q96DM3 657 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 TMEM176AQ96HP8 235 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 ATP6V1G3Q96LB4 118 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 GDAP1L1Q96MZ0 367 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 FAM107BQ9H098 131 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 AP5M1Q9H0R1 490 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 PABPC3Q9H361 631 aaKnown RBP7□□□□□ -1.29
HDLBP-243ENST00000488923 SYNCQ9H7C4 482 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 FAM153AQ9UHL3 310 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 BARX2Q9UMQ3 279 aaPredicted RBP7□□□□□ -1.29
HDLBP-243ENST00000488923 PLAAQ9Y263 795 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 UMODL1Q5DID0 1318 aa7□□□□□ -1.29
HDLBP-243ENST00000488923 WDR81Q562E7 1941 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 MYH10P35580 1976 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 SIGLEC16A6NMB1 481 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 SHOX2O60902 331 aaPredicted RBP6.99□□□□□ -1.29
HDLBP-243ENST00000488923 CILPO75339 1184 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 RNF8O76064 485 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 NFICP08651 508 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 FAM163BP0C2L3 166 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 KRT3P12035 628 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 RARGP13631 454 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 ATF2P15336 505 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 CD19P15391 556 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 CD58P19256 250 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 ATP5DP30049 168 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 RGS2P41220 211 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 PNPLA4P41247 253 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 SSR1P43307 286 aaKnown RBP6.99□□□□□ -1.29
HDLBP-243ENST00000488923 MARCKSL1P49006 195 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 PMS2P54278 862 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 MRPS25P82663 173 aaKnown RBP6.99□□□□□ -1.29
HDLBP-243ENST00000488923 PTPN11Q06124 597 aaPredicted RBP6.99□□□□□ -1.29
HDLBP-243ENST00000488923 DHX9Q08211 1270 aaKnown RBP6.99□□□□□ -1.29
HDLBP-243ENST00000488923 ADCY2Q08462 1091 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 INCA1Q0VD86 236 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 PTK6Q13882 451 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 SLC10A6Q3KNW5 377 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 SEZ6Q53EL9 994 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 C4orf48Q5BLP8 95 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 CEP85LQ5SZL2 805 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 JADE1Q6IE81 842 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 KDM7AQ6ZMT4 941 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 CATSPER4Q7RTX7 472 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 UNC93AQ86WB7 457 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 ZDHHC17Q8IUH5 632 aa6.99□□□□□ -1.29
HDLBP-243ENST00000488923 PASD1Q8IV76 773 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms