RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 PCED1BQ96HM7 432 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 KLHL5Q96PQ7 755 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 DNAJC7Q99615 494 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 PKMYT1Q99640 499 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 B3GNT5Q9BYG0 378 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 RHOBTB2Q9BYZ6 727 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 RXFP1Q9HBX9 757 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 KRT82Q9NSB4 513 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 AIPL1Q9NZN9 384 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 FNIP2Q9P278 1114 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 ZNF638Q14966 1978 aaKnown RBP13.08□□□□□ -0.32
TRAIP-209ENST00000488860 MTMR11A4FU01 709 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 LILRB3O75022 631 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 MICAL2O94851 1124 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 SERPING1P05155 500 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 MMEP08473 750 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 BDNFP23560 247 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 ADCY1Q08828 1119 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 CCDC173Q0VFZ6 552 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 NFE2Q16621 373 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-209ENST00000488860 FAM171BQ6P995 826 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 CCDC186Q7Z3E2 898 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 RBM23Q86U06 439 aaKnown RBP13.07□□□□□ -0.32
TRAIP-209ENST00000488860 GPR65Q8IYL9 337 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 MRPL43Q8N983 215 aaKnown RBP13.07□□□□□ -0.32
TRAIP-209ENST00000488860 SYN2Q92777 582 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-209ENST00000488860 MRPL38Q96DV4 380 aaKnown RBP13.07□□□□□ -0.32
TRAIP-209ENST00000488860 SEPT5Q99719 369 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-209ENST00000488860 ZNF518BQ9C0D4 1074 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 DEF6Q9H4E7 631 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 HAUS4Q9H6D7 363 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 HESX1Q9UBX0 185 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 NOCTQ9UK39 431 aaKnown RBP13.07□□□□□ -0.32
TRAIP-209ENST00000488860 TSPAN16Q9UKR8 245 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 KIAA1257Q9ULG3 409 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAIP-209ENST00000488860 PCDHB5Q9Y5E4 795 aa13.07□□□□□ -0.32
TRAIP-209ENST00000488860 CDH23Q9H251 3354 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 O00370 1275 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 PER2O15055 1255 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 AP1G2O75843 785 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 GLUD1P00367 558 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 PLEKP08567 350 aaPredicted RBP13.06□□□□□ -0.32
TRAIP-209ENST00000488860 CFHP08603 1231 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 FAM200BP0CF97 657 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 ELF1P32519 619 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 GPR17Q13304 367 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 RAB33AQ14088 237 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 GRIN2CQ14957 1233 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 STILQ15468 1287 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 MGAT5BQ3V5L5 792 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 ARHGAP17Q68EM7 881 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 LLGL2Q6P1M3 1020 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 IRF2BP2Q7Z5L9 587 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 SCN4BQ8IWT1 228 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 FUKQ8N0W3 1084 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 TTC9BQ8N6N2 239 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 ATAD1Q8NBU5 361 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 UBA3Q8TBC4 463 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 ZNF606Q8WXB4 792 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 SMARCD1Q96GM5 515 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 PANX2Q96RD6 677 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 AGPAT1Q99943 283 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 ZSWIM1Q9BR11 485 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAIP-209ENST00000488860 CEP83Q9Y592 693 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 IRAK3Q9Y616 596 aa13.06□□□□□ -0.32
TRAIP-209ENST00000488860 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 PRRG1O14668 218 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 TGM5O43548 720 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 CLASP2O75122 1294 aaKnown RBP13.05□□□□□ -0.32
TRAIP-209ENST00000488860 SOAT2O75908 522 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 SPATA31D3P0C874 917 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 TNFAIP3P21580 790 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 IGFBP4P22692 258 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 CYP2F1P24903 491 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 PRKCIP41743 596 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 NRIP1P48552 1158 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 BCAT1P54687 386 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 FMO1Q01740 532 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 CDR2Q01850 454 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 HGSNATQ68CP4 663 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 DENND1BQ6P3S1 775 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 WDR59Q6PJI9 974 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 SPATA31D4Q6ZUB0 917 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 ZNF571Q7Z3V5 609 aaPredicted RBP13.05□□□□□ -0.32
TRAIP-209ENST00000488860 ZNF677Q86XU0 584 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 SPPL2BQ8TCT7 592 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 C2orf15Q8WU43 125 aaKnown RBP13.05□□□□□ -0.32
TRAIP-209ENST00000488860 DDX1Q92499 740 aaKnown RBP13.05□□□□□ -0.32
TRAIP-209ENST00000488860 SECISBP2LQ93073 1101 aaKnown RBP13.05□□□□□ -0.32
TRAIP-209ENST00000488860 PPP2R3CQ969Q6 453 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 PDLIM2Q96JY6 352 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 HNRNPABQ99729 332 aaKnown RBP13.05□□□□□ -0.32
TRAIP-209ENST00000488860 NSUN3Q9H649 340 aaKnown RBP13.05□□□□□ -0.32
TRAIP-209ENST00000488860 TLE6Q9H808 572 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 CYP4F11Q9HBI6 524 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms