RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TSG101Q99816 390 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 GPR88Q9GZN0 384 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 KIAA1468Q9P260 1216 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 MAGEC2Q9UBF1 373 aaPredicted RBP17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 SLC16A3O15427 465 aaKnown RBP17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 FGF19O95750 216 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 F11P03951 625 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 BDNFP23560 247 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 PPP1R2P41236 205 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 ASPAP45381 313 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 VCPP55072 806 aaKnown RBP17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 MAPRE1Q15691 268 aaKnown RBP17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 CAMK4Q16566 473 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 MDH1BQ5I0G3 518 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 IER5LQ5T953 404 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 FOXR2Q6PJQ5 311 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 C4orf50Q6ZRC1 276 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 ZSCAN18Q8TBC5 510 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 SEMA4DQ92854 862 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 MYRFLQ96LU7 910 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 BCO2Q9BYV7 579 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 ATXN3LQ9H3M9 355 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 ZFP14Q9HCL3 533 aa17.02■□□□□ 0.32
CTDSP1-209ENST00000488627 ZDBF2Q9HCK1 2354 aa17.02■□□□□ 0.31
CTDSP1-209ENST00000488627 NCANO14594 1321 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 SLC38A8A6NNN8 435 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 A8MXQ7 604 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 NOL4O94818 638 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 CSH1P0DML2 217 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 CSH2P0DML3 217 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 AVPR2P30518 371 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 VIPR2P41587 438 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 PIK3CAP42336 1068 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 NLRP12P59046 1061 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 STIM1Q13586 685 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 KRT39Q6A163 491 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 KLHL10Q6JEL2 608 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 VSTM1Q6UX27 236 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 SCARA5Q6ZMJ2 495 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 SIX5Q8N196 739 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 B3GALNT2Q8NCR0 500 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 RSPRY1Q96DX4 576 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 B3GNT5Q9BYG0 378 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 MMRN2Q9H8L6 949 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 TMEM30AQ9NV96 361 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 FBXL21Q9UKT6 434 aa17.01■□□□□ 0.31
CTDSP1-209ENST00000488627 P4HA1P13674 534 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 WEE1P30291 646 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 CDC25CP30307 473 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 CACNA2D1P54289 1103 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 NOP14P78316 857 aaKnown RBP17■□□□□ 0.31
CTDSP1-209ENST00000488627 CYP4F8P98187 520 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 CYP27A1Q02318 531 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 TAF12Q16514 161 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 GPR158Q5T848 1215 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 CWF19L1Q69YN2 538 aaKnown RBP17■□□□□ 0.31
CTDSP1-209ENST00000488627 VITQ6UXI7 678 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 PAQR9Q6ZVX9 377 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 FILIP1Q7Z7B0 1213 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 ARID3BQ8IVW6 561 aaPredicted RBP17■□□□□ 0.31
CTDSP1-209ENST00000488627 SCN4BQ8IWT1 228 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 CRYBG2Q8N1P7 616 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 TRIML1Q8N9V2 468 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 NELFBQ8WX92 580 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 TRMT2BQ96GJ1 504 aaKnown RBP17■□□□□ 0.31
CTDSP1-209ENST00000488627 SPATA17Q96L03 361 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 CEP63Q96MT8 703 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 LRRC3BQ96PB8 259 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 SLC46A2Q9BY10 475 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 ZNF518BQ9C0D4 1074 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 TASP1Q9H6P5 420 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 LMBRD1Q9NUN5 540 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 HMGXB4Q9UGU5 601 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 COQ4Q9Y3A0 265 aa17■□□□□ 0.31
CTDSP1-209ENST00000488627 ARIH1Q9Y4X5 557 aaPredicted RBP17■□□□□ 0.31
CTDSP1-209ENST00000488627 CLDN5O00501 218 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 TADA3O75528 432 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 MXI1P50539 228 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 CBWD6Q4V339 395 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 CBWD3Q5JTY5 395 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 CBWD5Q5RIA9 395 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 GPIHBP1Q8IV16 184 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 SUGP1Q8IWZ8 645 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 SLC35C1Q96A29 364 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 C8orf48Q96LL4 319 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 CEP295NLQ96MC4 621 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 IPO9Q96P70 1041 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 MED15Q96RN5 788 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 SLITRK6Q9H5Y7 841 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 CYP3A43Q9HB55 503 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 RAB20Q9NX57 234 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 ARMCX3Q9UH62 379 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 CA14Q9ULX7 337 aa16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 MAGED2Q9UNF1 606 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-209ENST00000488627 HEPACAM2A8MVW5 462 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 F8VP50 259 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 PI15O43692 258 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 STX10O60499 249 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 GRIK1P39086 918 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms