RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 DDR2Q16832 855 aa25.28■■□□□ 1.64
RHBDD3-205ENST00000488106 SCN4BQ8IWT1 228 aa25.28■■□□□ 1.64
RHBDD3-205ENST00000488106 TAF4BQ92750 862 aa25.28■■□□□ 1.64
RHBDD3-205ENST00000488106 CLSTN2Q9H4D0 955 aa25.28■■□□□ 1.64
RHBDD3-205ENST00000488106 MAGEC2Q9UBF1 373 aaPredicted RBP25.28■■□□□ 1.64
RHBDD3-205ENST00000488106 MICAL2O94851 1124 aa25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 STX17P56962 302 aa25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 NOP14P78316 857 aaKnown RBP25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 MAPRE1Q15691 268 aaKnown RBP25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 CFAP221Q4G0U5 840 aa25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 MYCBPAPQ8TBZ2 947 aa25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 PBXIP1Q96AQ6 731 aa25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 PCED1BQ96HM7 432 aa25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 FUBP3Q96I24 572 aaKnown RBP eCLIP25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 GBP4Q96PP9 640 aa25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 FBXL21Q9UKT6 434 aa25.27■■□□□ 1.64
RHBDD3-205ENST00000488106 COL4A2P08572 1712 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 BICDL2A1A5D9 508 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 STX10O60499 249 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 PDGFBP01127 241 aaPredicted RBP25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 CFHP08603 1231 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 FAM163BP0C2L3 166 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 GTF2H1P32780 548 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 ASPAP45381 313 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 RPL10AP62906 217 aaKnown RBP25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 PAK1Q13153 545 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 FAM78AQ5JUQ0 283 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 STXBP5Q5T5C0 1151 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 KRT39Q6A163 491 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 TTI2Q6NXR4 508 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 GAREM2Q75VX8 874 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 TRIML1Q8N9V2 468 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 ZSWIM3Q96MP5 696 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 DUSP9Q99956 384 aaKnown RBP25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 ATXN3LQ9H3M9 355 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 ARMCX3Q9UH62 379 aaPredicted RBP25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 MAGED2Q9UNF1 606 aaPredicted RBP25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 COL4A3Q01955 1670 aa25.26■■□□□ 1.63
RHBDD3-205ENST00000488106 MUC6Q6W4X9 2439 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 LRRN2O75325 713 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 SRFP11831 508 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 PTPN1P18031 435 aaKnown RBP25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 BDNFP23560 247 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 CYP4F8P98187 520 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 ORC1Q13415 861 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 B3GALNT2Q8NCR0 500 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 CCDC150Q8NCX0 1101 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 GCNAQ96QF7 691 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 APOBEC3GQ9HC16 384 aaKnown RBP25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 LMBRD1Q9NUN5 540 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 HMGXB4Q9UGU5 601 aa25.25■■□□□ 1.63
RHBDD3-205ENST00000488106 FGF19O95750 216 aa25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 COL9A1P20849 921 aa25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 FCARP24071 287 aa25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 MAGEA11P43364 429 aa25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 CCDC40Q4G0X9 1142 aa25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 ZSCAN18Q8TBC5 510 aaPredicted RBP25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 SEMA4DQ92854 862 aa25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 CEP63Q96MT8 703 aa25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 ASB16Q96NS5 453 aa25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 NUP62CLQ9H1M0 184 aa25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 IL21Q9HBE4 155 aa25.24■■□□□ 1.63
RHBDD3-205ENST00000488106 CDC25CP30307 473 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 GRIK1P39086 918 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 MCCD1P59942 119 aaPredicted RBP25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 CBWD6Q4V339 395 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 ARHGAP15Q53QZ3 475 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 CBWD3Q5JTY5 395 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 CBWD5Q5RIA9 395 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 GPR158Q5T848 1215 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 TANGO2Q6ICL3 276 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 FBXL13Q8NEE6 735 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 SMARCD2Q92925 531 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 PLA2G2FQ9BZM2 168 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 NIF3L1Q9GZT8 377 aa25.23■■□□□ 1.63
RHBDD3-205ENST00000488106 SLC38A8A6NNN8 435 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 CLDN5O00501 218 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 ECI2O75521 394 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 CSH1P0DML2 217 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 CSH2P0DML3 217 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 HMGA1P17096 107 aaKnown RBP25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 NDST1P52848 882 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 BMP8AQ7Z5Y6 402 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 ACOT1Q86TX2 421 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 SIX5Q8N196 739 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 SLC35C1Q96A29 364 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 B3GNT5Q9BYG0 378 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 BCO2Q9BYV7 579 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 ZNF518BQ9C0D4 1074 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 MFSD1Q9H3U5 465 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 ZFP14Q9HCL3 533 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 CA14Q9ULX7 337 aa25.22■■□□□ 1.63
RHBDD3-205ENST00000488106 CD58P19256 250 aa25.21■■□□□ 1.63
RHBDD3-205ENST00000488106 ANXA13P27216 316 aa25.21■■□□□ 1.63
RHBDD3-205ENST00000488106 VIPR2P41587 438 aa25.21■■□□□ 1.63
RHBDD3-205ENST00000488106 GPC5P78333 572 aa25.21■■□□□ 1.63
RHBDD3-205ENST00000488106 VSTM1Q6UX27 236 aa25.21■■□□□ 1.63
RHBDD3-205ENST00000488106 FILIP1Q7Z7B0 1213 aa25.21■■□□□ 1.63
RHBDD3-205ENST00000488106 GPIHBP1Q8IV16 184 aa25.21■■□□□ 1.63
RHBDD3-205ENST00000488106 SUGP1Q8IWZ8 645 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms