RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 PDGFRBP09619 1106 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 GLULP15104 373 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 CD72P21854 359 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 MAGEA11P43364 429 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 CASP4P49662 377 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 NLRP12P59046 1061 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 MYL6P60660 151 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 FCHO2Q0JRZ9 810 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 KCNB1Q14721 858 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 UBXN2BQ14CS0 331 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 DDR2Q16832 855 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 C4orf50Q6ZRC1 276 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 TPRG1Q6ZUI0 275 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 YAF2Q8IY57 180 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 PLEKHO2Q8TD55 490 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
ITSN1-229ENST00000487427 RSPRY1Q96DX4 576 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 SYT15Q9BQS2 421 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 SLC46A2Q9BY10 475 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 XYLT2Q9H1B5 865 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 SNX25Q9H3E2 840 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 LTB4R2Q9NPC1 389 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 TRAF3IP3Q9Y228 551 aa13.32□□□□□ -0.28
ITSN1-229ENST00000487427 MTF2Q9Y483 593 aaPredicted RBP13.32□□□□□ -0.28
ITSN1-229ENST00000487427 GOLGA6L4A6NEF3 574 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 CHADO15335 359 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 NCAM2O15394 837 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 HCRTO43612 131 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 CALUO43852 315 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-229ENST00000487427 C4BPAP04003 597 aaKnown RBP13.31□□□□□ -0.28
ITSN1-229ENST00000487427 DDX6P26196 483 aaKnown RBP eCLIP13.31□□□□□ -0.28
ITSN1-229ENST00000487427 NBL1P41271 181 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 GPR15P49685 360 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 MLLT6P55198 1093 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-229ENST00000487427 TNNC1P63316 161 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 BIRC3Q13489 604 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 TMEM150AQ86TG1 271 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 GPIHBP1Q8IV16 184 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 C1orf210Q8IVY1 113 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 GUF1Q8N442 669 aaKnown RBP13.31□□□□□ -0.28
ITSN1-229ENST00000487427 OR6B3Q8NGW1 331 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 TRMT2BQ96GJ1 504 aaKnown RBP13.31□□□□□ -0.28
ITSN1-229ENST00000487427 MYRFLQ96LU7 910 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 CEP295NLQ96MC4 621 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 MRPL45Q9BRJ2 306 aaKnown RBP13.31□□□□□ -0.28
ITSN1-229ENST00000487427 BCO2Q9BYV7 579 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 VRTNQ9H8Y1 702 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 CRTAC1Q9NQ79 661 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 MAGEC2Q9UBF1 373 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-229ENST00000487427 UXTQ9UBK9 157 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-229ENST00000487427 FRMD4BQ9Y2L6 1034 aa13.31□□□□□ -0.28
ITSN1-229ENST00000487427 ZFHX2Q9C0A1 2572 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 SHISA7A6NL88 538 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 SLC38A8A6NNN8 435 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 LRRIQ3A6PVS8 624 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 ARNTLO00327 626 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 IKBKBO14920 756 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 MAPK13O15264 365 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 LRRN2O75325 713 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 NOL4O94818 638 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 PTPN1P18031 435 aaKnown RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 RPL13P26373 211 aaKnown RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 MAGEA9P43362 315 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 PSMC1P62191 440 aaKnown RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 CYP4F8P98187 520 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 NCOA4Q13772 614 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 NFIL3Q16649 462 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 CCDC142Q17RM4 750 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 ARHGAP29Q52LW3 1261 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 SDHAF4Q5VUM1 108 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 TDRD10Q5VZ19 366 aaKnown RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 CEP135Q66GS9 1140 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 VSTM1Q6UX27 236 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 MON1AQ86VX9 555 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 SCN4BQ8IWT1 228 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 CMTM8Q8IZV2 173 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 FMR1NBQ8N0W7 255 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 CELF5Q8N6W0 485 aaKnown RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 MYCBPAPQ8TBZ2 947 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 MRPS31Q92665 395 aaKnown RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 CLDN23Q96B33 292 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 LRRC3BQ96PB8 259 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 NXF1Q9UBU9 619 aaKnown RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 MAGED2Q9UNF1 606 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-229ENST00000487427 MAPK8IP1Q9UQF2 711 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 NCANO14594 1321 aa13.3□□□□□ -0.28
ITSN1-229ENST00000487427 PRAMEF12O95522 483 aa13.29□□□□□ -0.28
ITSN1-229ENST00000487427 BDNFP23560 247 aa13.29□□□□□ -0.28
ITSN1-229ENST00000487427 TARSP26639 723 aaKnown RBP13.29□□□□□ -0.28
ITSN1-229ENST00000487427 AVPR1AP37288 418 aa13.29□□□□□ -0.28
ITSN1-229ENST00000487427 RPS9P46781 194 aaKnown RBP13.29□□□□□ -0.28
ITSN1-229ENST00000487427 DLG4P78352 724 aa13.29□□□□□ -0.28
ITSN1-229ENST00000487427 CYP27A1Q02318 531 aa13.29□□□□□ -0.28
ITSN1-229ENST00000487427 SGSM1Q2NKQ1 1148 aa13.29□□□□□ -0.28
ITSN1-229ENST00000487427 ZNF699Q32M78 642 aa13.29□□□□□ -0.28
ITSN1-229ENST00000487427 ZACNQ401N2 412 aa13.29□□□□□ -0.28
ITSN1-229ENST00000487427 ZNF667Q5HYK9 610 aa13.29□□□□□ -0.28
ITSN1-229ENST00000487427 TXNDC8Q6A555 127 aa13.29□□□□□ -0.28
ITSN1-229ENST00000487427 MAB21L3Q8N8X9 362 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms