RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 USP13Q92995 863 aaPredicted RBP26.32■■□□□ 1.8
LIME1-206ENST00000487026 ABCB6Q9NP58 842 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 SLC39A2Q9NP94 309 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 GKN1Q9NS71 199 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 THG1LQ9NWX6 298 aaKnown RBP26.32■■□□□ 1.8
LIME1-206ENST00000487026 FAM13BQ9NYF5 915 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 LILRB5O75023 590 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 CST3P01034 146 aaPredicted RBP26.31■■□□□ 1.8
LIME1-206ENST00000487026 PDGFRBP09619 1106 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 TDGF1P13385 188 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 PCSK1P29120 753 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 PSMC1P62191 440 aaKnown RBP26.31■■□□□ 1.8
LIME1-206ENST00000487026 SATB1Q01826 763 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 DNM1Q05193 864 aaKnown RBP26.31■■□□□ 1.8
LIME1-206ENST00000487026 PON2Q15165 354 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 MAMSTRQ6ZN01 415 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 LIMS2Q7Z4I7 341 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 RALGPS2Q86X27 583 aaPredicted RBP26.31■■□□□ 1.8
LIME1-206ENST00000487026 WDR49Q8IV35 697 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 CCDC127Q96BQ5 260 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 MSANTD3Q96H12 275 aa26.31■■□□□ 1.8
LIME1-206ENST00000487026 TNNI1P19237 187 aa26.3■■□□□ 1.8
LIME1-206ENST00000487026 PLCB2Q00722 1185 aa26.3■■□□□ 1.8
LIME1-206ENST00000487026 FAM171BQ6P995 826 aa26.3■■□□□ 1.8
LIME1-206ENST00000487026 Q6ZS52 159 aa26.3■■□□□ 1.8
LIME1-206ENST00000487026 DPH6Q7L8W6 267 aa26.3■■□□□ 1.8
LIME1-206ENST00000487026 MON1AQ86VX9 555 aa26.3■■□□□ 1.8
LIME1-206ENST00000487026 SPATA18Q8TC71 538 aa26.3■■□□□ 1.8
LIME1-206ENST00000487026 MRPS31Q92665 395 aaKnown RBP26.3■■□□□ 1.8
LIME1-206ENST00000487026 MMS19Q96T76 1030 aa26.3■■□□□ 1.8
LIME1-206ENST00000487026 SYT15Q9BQS2 421 aa26.3■■□□□ 1.8
LIME1-206ENST00000487026 MAGEF1Q9HAY2 307 aa26.3■■□□□ 1.8
LIME1-206ENST00000487026 TADA3O75528 432 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 NOL4O94818 638 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 PDIA4P13667 645 aaKnown RBP26.29■■□□□ 1.8
LIME1-206ENST00000487026 DDX6P26196 483 aaKnown RBP eCLIP26.29■■□□□ 1.84e-8■■□□□ 14.4
LIME1-206ENST00000487026 CXCL12P48061 93 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 CCR3P51677 355 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 CYP24A1Q07973 514 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 LRRC32Q14392 662 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 ITPRIPL2Q3MIP1 535 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 TRIM68Q6AZZ1 485 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 C1orf228Q6PIY5 440 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 XXYLT1Q8NBI6 393 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 RIN3Q8TB24 985 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 FNBP1Q96RU3 617 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 CYP2S1Q96SQ9 504 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 IER2Q9BTL4 223 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 TRPC7Q9HCX4 862 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 CRTAC1Q9NQ79 661 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 TDP1Q9NUW8 608 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 SERTAD1Q9UHV2 236 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 ZMYM5Q9UJ78 669 aa26.29■■□□□ 1.8
LIME1-206ENST00000487026 PSMD6Q15008 389 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 CFAP221Q4G0U5 840 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 SPEM1Q8N4L4 309 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 ZNF516Q92618 1163 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 CGRRF1Q99675 332 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 FAM83CQ9BQN1 747 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 MRPL45Q9BRJ2 306 aaKnown RBP26.28■■□□□ 1.8
LIME1-206ENST00000487026 FAM126AQ9BYI3 521 aaPredicted RBP26.28■■□□□ 1.8
LIME1-206ENST00000487026 EBF3Q9H4W6 596 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 C2orf42Q9NWW7 574 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 NCDNQ9UBB6 729 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 MAGEC2Q9UBF1 373 aaPredicted RBP26.28■■□□□ 1.8
LIME1-206ENST00000487026 RCOR1Q9UKL0 485 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 CFAP45Q9UL16 551 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 CDH9Q9ULB4 789 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 SMG5Q9UPR3 1016 aaKnown RBP26.28■■□□□ 1.8
LIME1-206ENST00000487026 DCHS1Q96JQ0 3298 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 DMXL1Q9Y485 3027 aa26.28■■□□□ 1.8
LIME1-206ENST00000487026 KIF26AQ9ULI4 1882 aaPredicted RBP26.28■■□□□ 1.8
LIME1-206ENST00000487026 DENND4CQ5VZ89 1909 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 PVALEFA0A1B0GWK0 134 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 OTOL1A6NHN0 477 aaPredicted RBP26.27■■□□□ 1.8
LIME1-206ENST00000487026 WARSP23381 471 aaKnown RBP26.27■■□□□ 1.8
LIME1-206ENST00000487026 PPP2R5DQ14738 602 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 ATL3Q6DD88 541 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 HS2ST1Q7LGA3 356 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 TTC16Q8NEE8 873 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 MYLPFQ96A32 169 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 TRMT2BQ96GJ1 504 aaKnown RBP26.27■■□□□ 1.8
LIME1-206ENST00000487026 FUBP3Q96I24 572 aaKnown RBP eCLIP26.27■■□□□ 1.8
LIME1-206ENST00000487026 MYRFLQ96LU7 910 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 SLC22A12Q96S37 553 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 GZF1Q9H116 711 aaPredicted RBP26.27■■□□□ 1.8
LIME1-206ENST00000487026 EPC1Q9H2F5 836 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 HPS4Q9NQG7 708 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 UXTQ9UBK9 157 aaPredicted RBP26.27■■□□□ 1.8
LIME1-206ENST00000487026 UBE4BO95155 1302 aa26.27■■□□□ 1.8
LIME1-206ENST00000487026 BDNFP23560 247 aa26.26■■□□□ 1.79
LIME1-206ENST00000487026 HOXC13P31276 330 aa26.26■■□□□ 1.79
LIME1-206ENST00000487026 NRLP54845 237 aa26.26■■□□□ 1.79
LIME1-206ENST00000487026 DMWDQ09019 674 aa26.26■■□□□ 1.79
LIME1-206ENST00000487026 DGKKQ5KSL6 1271 aa26.26■■□□□ 1.79
LIME1-206ENST00000487026 C4orf50Q6ZRC1 276 aa26.26■■□□□ 1.79
LIME1-206ENST00000487026 CEP57L1Q8IYX8 460 aa26.26■■□□□ 1.79
LIME1-206ENST00000487026 RMDN1Q96DB5 314 aa26.26■■□□□ 1.79
LIME1-206ENST00000487026 CHAMP1Q96JM3 812 aa26.26■■□□□ 1.79
LIME1-206ENST00000487026 NME7Q9Y5B8 376 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms