RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 JKAMPQ9P055 326 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.57□□□□□ -1.52
SMC4-218ENST00000486711 PAXBP1Q9Y5B6 917 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 USP19O94966 1318 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 LOC102724159A0A0B4J2E5 919 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 MYO1FO00160 1098 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 TBX3O15119 743 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 KPNA5O15131 536 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 SLC43A1O75387 559 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 ZFPL1O95159 310 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 ANXA1P04083 346 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 GJB1P08034 283 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 SETSIPP0DME0 302 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 EN2P19622 333 aaPredicted RBP5.56□□□□□ -1.52
SMC4-218ENST00000486711 FOLR3P41439 243 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 PRIM2P49643 509 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 FMO1Q01740 532 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 SLFN5Q08AF3 891 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 PWP2Q15269 919 aaKnown RBP5.56□□□□□ -1.52
SMC4-218ENST00000486711 C1orf228Q6PIY5 440 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 ZNF365Q70YC5 407 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 PDSS2Q86YH6 399 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 CELF5Q8N6W0 485 aaKnown RBP5.56□□□□□ -1.52
SMC4-218ENST00000486711 ENAHQ8N8S7 591 aaPredicted RBP5.56□□□□□ -1.52
SMC4-218ENST00000486711 NAF1Q96HR8 494 aaKnown RBP5.56□□□□□ -1.52
SMC4-218ENST00000486711 RIPOR3Q96MK2 946 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 ARPC5LQ9BPX5 153 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 SELENOOQ9BVL4 669 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 WDR26Q9H7D7 661 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 ARFGAP3Q9NP61 516 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.56□□□□□ -1.52
SMC4-218ENST00000486711 SACM1LQ9NTJ5 587 aa5.56□□□□□ -1.52
SMC4-218ENST00000486711 AFF4Q9UHB7 1163 aaKnown RBP5.56□□□□□ -1.52
SMC4-218ENST00000486711 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMC4-218ENST00000486711 CCDC151A5D8V7 595 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 LRRC3CA6NJW4 275 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 RARBP10826 455 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 FCER1AP12319 257 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 HDCP19113 662 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 SERPINB3P29508 390 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 PHKA1P46020 1223 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 STT3AP46977 705 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 CASP5P51878 434 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 KRTAP10-11P60412 298 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 PSMC1P62191 440 aaKnown RBP5.55□□□□□ -1.52
SMC4-218ENST00000486711 FOXF2Q12947 444 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 KIF22Q14807 665 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 SF3B3Q15393 1217 aaKnown RBP5.55□□□□□ -1.52
SMC4-218ENST00000486711 AKNAD1Q5T1N1 836 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 XRRA1Q6P2D8 792 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 GRASPQ7Z6J2 395 aaPredicted RBP5.55□□□□□ -1.52
SMC4-218ENST00000486711 SRRM1Q8IYB3 904 aaKnown RBP5.55□□□□□ -1.52
SMC4-218ENST00000486711 CCDC33Q8N5R6 958 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 OR2C3Q8N628 320 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 PCSK9Q8NBP7 692 aaKnown RBP5.55□□□□□ -1.52
SMC4-218ENST00000486711 DEPTORQ8TB45 409 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 DDX17Q92841 729 aaKnown RBP5.55□□□□□ -1.52
SMC4-218ENST00000486711 SGCZQ96LD1 299 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 UROC1Q96N76 676 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 P2RX7Q99572 595 aaKnown RBP5.55□□□□□ -1.52
SMC4-218ENST00000486711 TRIM54Q9BYV2 358 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 SIK2Q9H0K1 926 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 STARD7Q9NQZ5 370 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 CPNE7Q9UBL6 633 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 PADI4Q9UM07 663 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 MED16Q9Y2X0 877 aa5.55□□□□□ -1.52
SMC4-218ENST00000486711 A0A1W2PS29 197 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 POM121BA6NF01 834 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 ZNF785A8K8V0 405 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 IFRD1O00458 451 aaPredicted RBP5.54□□□□□ -1.52
SMC4-218ENST00000486711 IL18RAPO95256 599 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 THP07101 528 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 PARP1P09874 1014 aaKnown RBP5.54□□□□□ -1.52
SMC4-218ENST00000486711 SRGNP10124 158 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 TNFSF4P23510 183 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 CHAF1AQ13111 956 aaPredicted RBP5.54□□□□□ -1.52
SMC4-218ENST00000486711 SLC13A2Q13183 592 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 STK3Q13188 491 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 RAB32Q13637 225 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 DAG1Q14118 895 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 UTP14CQ5TAP6 766 aaKnown RBP5.54□□□□□ -1.52
SMC4-218ENST00000486711 LMBRD2Q68DH5 695 aaPredicted RBP5.54□□□□□ -1.52
SMC4-218ENST00000486711 KIAA0895LQ68EN5 471 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.54□□□□□ -1.52
SMC4-218ENST00000486711 MYLK4Q86YV6 388 aaPredicted RBP5.54□□□□□ -1.52
SMC4-218ENST00000486711 CERS3Q8IU89 383 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 Q8NA96 180 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 VPS37AQ8NEZ2 397 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 ZC3H10Q96K80 434 aaKnown RBP5.54□□□□□ -1.52
SMC4-218ENST00000486711 ASB6Q9NWX5 421 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 ARPP21Q9UBL0 812 aaPredicted RBP5.54□□□□□ -1.52
SMC4-218ENST00000486711 NEU2Q9Y3R4 380 aa5.54□□□□□ -1.52
SMC4-218ENST00000486711 MYO1CO00159 1063 aa5.53□□□□□ -1.52
SMC4-218ENST00000486711 BTN3A1O00481 513 aa5.53□□□□□ -1.52
SMC4-218ENST00000486711 YY2O15391 372 aa5.53□□□□□ -1.52
SMC4-218ENST00000486711 AGFG2O95081 481 aa5.53□□□□□ -1.52
SMC4-218ENST00000486711 CHEK2O96017 543 aa5.53□□□□□ -1.52
SMC4-218ENST00000486711 ZNF543Q08ER8 600 aa5.53□□□□□ -1.52
SMC4-218ENST00000486711 NBPF8Q3BBV2 869 aa5.53□□□□□ -1.52
SMC4-218ENST00000486711 GRAMD1BQ3KR37 738 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms