RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SYT15Q9BQS2 421 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 CLSTN3Q9BQT9 956 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 ACBD6Q9BR61 282 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 LMAN2LQ9H0V9 348 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 CRTAC1Q9NQ79 661 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 TMLHEQ9NVH6 421 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 AIPL1Q9NZN9 384 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 MTRRQ9UBK8 725 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 PRKAG3Q9UGI9 489 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 MUTYHQ9UIF7 546 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 CDH9Q9ULB4 789 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 H7C4K7 107 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 FSCN2O14926 492 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 URODP06132 367 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 PAEPP09466 180 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 UBE3AQ05086 875 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 ADAM15Q13444 863 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 PTPN14Q15678 1187 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 ASIC2Q16515 512 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 FAM171BQ6P995 826 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 WDR59Q6PJI9 974 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 CCDC186Q7Z3E2 898 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 TMC7Q7Z402 723 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 B3GALNT2Q8NCR0 500 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 ANP32BQ92688 251 aaKnown RBP13.59□□□□□ -0.23
HDAC6-229ENST00000486665 SYN2Q92777 582 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-229ENST00000486665 MSLNLQ96KJ4 702 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 DNAJC7Q99615 494 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 TCF25Q9BQ70 676 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 ZCWPW1Q9H0M4 648 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 RXFP1Q9HBX9 757 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 MRPL17Q9NRX2 175 aaKnown RBP13.59□□□□□ -0.23
HDAC6-229ENST00000486665 ABHD10Q9NUJ1 306 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 CLEC1BQ9P126 229 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 STK39Q9UEW8 545 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 GTF3C4Q9UKN8 822 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 BACE2Q9Y5Z0 518 aa13.59□□□□□ -0.23
HDAC6-229ENST00000486665 VWA8A3KMH1 1905 aa13.58□□□□□ -0.23
HDAC6-229ENST00000486665 OR6C75A6NL08 312 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 HIDE1A8MVS5 230 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 GLP2RO95838 553 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 CFHP08603 1231 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 CD19P15391 556 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 FERP16591 822 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 BRD2P25440 801 aaKnown RBP13.58□□□□□ -0.24
HDAC6-229ENST00000486665 PCSK1P29120 753 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 HNRNPH3P31942 346 aaKnown RBP13.58□□□□□ -0.24
HDAC6-229ENST00000486665 ARPP19P56211 112 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 RBM10P98175 930 aaKnown RBP13.58□□□□□ -0.24
HDAC6-229ENST00000486665 SMAD4Q13485 552 aaKnown RBP13.58□□□□□ -0.24
HDAC6-229ENST00000486665 MDH1BQ5I0G3 518 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 INTS6LQ5JSJ4 861 aaKnown RBP13.58□□□□□ -0.24
HDAC6-229ENST00000486665 PLPP4Q5VZY2 271 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 HGSNATQ68CP4 663 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 SMYD5Q6GMV2 418 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 ZNF280DQ6N043 979 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 NOP9Q86U38 636 aaKnown RBP13.58□□□□□ -0.24
HDAC6-229ENST00000486665 CNGA4Q8IV77 575 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 MRPL43Q8N983 215 aaKnown RBP13.58□□□□□ -0.24
HDAC6-229ENST00000486665 SLC20A1Q8WUM9 679 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 DDX1Q92499 740 aaKnown RBP13.58□□□□□ -0.24
HDAC6-229ENST00000486665 B3GNT5Q9BYG0 378 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 NUCKS1Q9H1E3 243 aaKnown RBP13.58□□□□□ -0.24
HDAC6-229ENST00000486665 TLR9Q9NR96 1032 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 CDY1Q9Y6F8 540 aa13.58□□□□□ -0.24
HDAC6-229ENST00000486665 TSC2P49815 1807 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 USP34Q70CQ2 3546 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 C2orf71A6NGG8 1288 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 CLDN5O00501 218 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 TEX28O15482 410 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 VNN2O95498 520 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 PLEKP08567 350 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-229ENST00000486665 CNPP09543 421 aaKnown RBP13.57□□□□□ -0.24
HDAC6-229ENST00000486665 VDRP11473 427 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 CCDC130P13994 396 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 CYP11B1P15538 503 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 CHRNB2P17787 502 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 GNA15P30679 374 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 OR1D2P34982 312 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 CA8P35219 290 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 PRKCIP41743 596 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 BPIFB4P59827 614 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 TSPY1Q01534 308 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 NHLH1Q02575 133 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 PTK2Q05397 1052 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 SLC39A12Q504Y0 691 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 PPP1R26Q5T8A7 1209 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-229ENST00000486665 TAF3Q5VWG9 929 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 SLC8B1Q6J4K2 584 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 PAQR9Q6ZVX9 377 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 RNF135Q8IUD6 432 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 GLYCTKQ8IVS8 523 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 GPR65Q8IYL9 337 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 OLIG1Q8TAK6 271 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 MYCBPAPQ8TBZ2 947 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 MICAL1Q8TDZ2 1067 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 ZNF606Q8WXB4 792 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 TNIP3Q96KP6 325 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 KLHL5Q96PQ7 755 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 PPP1R9BQ96SB3 815 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms