RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 HEXIM2Q96MH2 286 aaKnown RBP12.61□□□□□ -0.39
PKP4-213ENST00000486254 HINFPQ9BQA5 517 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 FAM204AQ9H8W3 233 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 SLC38A7Q9NVC3 462 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.61□□□□□ -0.39
PKP4-213ENST00000486254 NFS1Q9Y697 457 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 ZNF487B1APH4 448 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 C6orf222P0C671 652 aaPredicted RBP12.6□□□□□ -0.39
PKP4-213ENST00000486254 RARBP10826 455 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 PAX3P23760 479 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 PSMA2P25787 234 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 RFC1P35251 1148 aaPredicted RBP12.6□□□□□ -0.39
PKP4-213ENST00000486254 TAF6P49848 677 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 ZNF143P52747 638 aaPredicted RBP12.6□□□□□ -0.39
PKP4-213ENST00000486254 TMEM62Q0P6H9 643 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 CALCOCO2Q13137 446 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 NOGQ13253 232 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 SPOCD1Q6ZMY3 1216 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 TMEM110Q86TL2 294 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 FAM228AQ86W67 206 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 CCDC50Q8IVM0 306 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 TOP6BLQ8N6T0 577 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 TTC13Q8NBP0 860 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 SMC1BQ8NDV3 1235 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 TRIB2Q92519 343 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 NKD2Q969F2 451 aaPredicted RBP12.6□□□□□ -0.39
PKP4-213ENST00000486254 SNF8Q96H20 258 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 CNPY3Q9BT09 278 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 SENP6Q9GZR1 1112 aaPredicted RBP12.6□□□□□ -0.39
PKP4-213ENST00000486254 DPH5Q9H2P9 285 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 PABPC3Q9H361 631 aaKnown RBP12.6□□□□□ -0.39
PKP4-213ENST00000486254 SYNCQ9H7C4 482 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 TUBGCP4Q9UGJ1 667 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 TSPAN16Q9UKR8 245 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 GINS2Q9Y248 185 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 DRG1Q9Y295 367 aaKnown RBP12.6□□□□□ -0.39
PKP4-213ENST00000486254 IPPQ9Y573 584 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 hCG_1818297A0A087WSY0 165 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 FAM170AA1A519 330 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 GOLGA6L10A6NI86 522 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 TMEM88BA6NKF7 163 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 F8VP50 259 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 SHOX2O60902 331 aaPredicted RBP12.6□□□□□ -0.39
PKP4-213ENST00000486254 CAND2O75155 1236 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 ADAMTS4O75173 837 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 LRCH4O75427 683 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 RPS6KA5O75582 802 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 KRT1P04264 644 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 CDKN2BP42772 138 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 PSMC4P43686 418 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 SKOR1P84550 965 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 KRT17Q04695 432 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 DHX9Q08211 1270 aaKnown RBP12.6□□□□□ -0.39
PKP4-213ENST00000486254 PPP1R7Q15435 360 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 GNASQ5JWF2 1037 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 CYP4A22Q5TCH4 519 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 RHBDF2Q6PJF5 856 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 RELL1Q8IUW5 271 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 SMG8Q8ND04 991 aaKnown RBP12.6□□□□□ -0.39
PKP4-213ENST00000486254 SPATA18Q8TC71 538 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 FBXO25Q8TCJ0 367 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 SLC35F5Q8WV83 523 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 TBCBQ99426 244 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 TMEM109Q9BVC6 243 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 ASNSD1Q9NWL6 643 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 PLAAQ9Y263 795 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 SNX9Q9Y5X1 595 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 SQORQ9Y6N5 450 aa12.6□□□□□ -0.39
PKP4-213ENST00000486254 C2CD4BA6NLJ0 364 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 KPNA7A9QM74 516 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 RNF8O76064 485 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 PFKMP08237 780 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 RARGP13631 454 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 DESP17661 470 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 IVDP26440 423 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 SSTR3P32745 418 aaPredicted RBP12.59□□□□□ -0.39
PKP4-213ENST00000486254 FLT3LGP49771 235 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 RAB27AP51159 221 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 BCAT1P54687 386 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 SOWAHAQ2M3V2 549 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 AGBL2Q5U5Z8 902 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 FAM43BQ6ZT52 329 aaPredicted RBP12.59□□□□□ -0.39
PKP4-213ENST00000486254 TRMT10CQ7L0Y3 403 aaKnown RBP12.59□□□□□ -0.39
PKP4-213ENST00000486254 KLHDC9Q8NEP7 349 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 CMASQ8NFW8 434 aaPredicted RBP12.59□□□□□ -0.39
PKP4-213ENST00000486254 ATP6V1G3Q96LB4 118 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 PPP1R10Q96QC0 940 aaKnown RBP12.59□□□□□ -0.39
PKP4-213ENST00000486254 HERPUD2Q9BSE4 406 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 PHACTR1Q9C0D0 580 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 CHST7Q9NS84 486 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 HESX1Q9UBX0 185 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 USTQ9Y2C2 406 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 SNX24Q9Y343 169 aa12.59□□□□□ -0.39
PKP4-213ENST00000486254 THSD7BQ9C0I4 1608 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 MYADML2A6NDP7 307 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 C3orf70A6NLC5 250 aaPredicted RBP12.58□□□□□ -0.4
PKP4-213ENST00000486254 SRRM3A6NNA2 597 aaPredicted RBP12.58□□□□□ -0.4
PKP4-213ENST00000486254 LIASO43766 372 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 CABYRO75952 493 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms