RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PIEZO1Q92508 2521 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 SHISA7A6NL88 538 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 LRRIQ3A6PVS8 624 aaPredicted RBP19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 CHADO15335 359 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 NCAM2O15394 837 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 CALUO43852 315 aaPredicted RBP19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 C4BPAP04003 597 aaKnown RBP19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 MAGEA11P43364 429 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 NLRP12P59046 1061 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 TNNC1P63316 161 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 KCNB1Q14721 858 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 C1orf210Q8IVY1 113 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 SYAP1Q96A49 352 aaPredicted RBP19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 CCDC34Q96HJ3 373 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 LRRC3BQ96PB8 259 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 MRPL45Q9BRJ2 306 aaKnown RBP19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 XYLT2Q9H1B5 865 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 SNX25Q9H3E2 840 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 CRTAC1Q9NQ79 661 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 MAGED2Q9UNF1 606 aaPredicted RBP19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 CACNA1HO95180 2353 aa19.69■□□□□ 0.74
PRPF40A-209ENST00000486100 SLC38A8A6NNN8 435 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 SOBPA7XYQ1 873 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 ARNTLO00327 626 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 NOL4O94818 638 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 DDX6P26196 483 aaKnown RBP eCLIP19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 TARSP26639 723 aaKnown RBP19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 MAGEA9P43362 315 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 MLLT6P55198 1093 aaPredicted RBP19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 PSMC1P62191 440 aaKnown RBP19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 BIRC3Q13489 604 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 TDRD10Q5VZ19 366 aaKnown RBP19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 SCN4BQ8IWT1 228 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 CMTM8Q8IZV2 173 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 OR6B3Q8NGW1 331 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 TMC2Q8TDI7 906 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 CLDN23Q96B33 292 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 TRMT2BQ96GJ1 504 aaKnown RBP19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 MYRFLQ96LU7 910 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 VRTNQ9H8Y1 702 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 UXTQ9UBK9 157 aaPredicted RBP19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 NXF1Q9UBU9 619 aaKnown RBP19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 FRMD4BQ9Y2L6 1034 aa19.68■□□□□ 0.74
PRPF40A-209ENST00000486100 FZD5Q13467 585 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 NFIL3Q16649 462 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 CEP135Q66GS9 1140 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 VSTM1Q6UX27 236 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 GUF1Q8N442 669 aaKnown RBP19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 STKLD1Q8NE28 680 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 MYCBPAPQ8TBZ2 947 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 BPIFB1Q8TDL5 484 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 CSGALNACT1Q8TDX6 532 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 MRPS31Q92665 395 aaKnown RBP19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 MYLPFQ96A32 169 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 MAPK8IP1Q9UQF2 711 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 NME7Q9Y5B8 376 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 PIAS3Q9Y6X2 628 aa19.67■□□□□ 0.74
PRPF40A-209ENST00000486100 TCHHQ07283 1943 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 GOLGA6L4A6NEF3 574 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 IKBKBO14920 756 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 MAPK13O15264 365 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 PRAMEF12O95522 483 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 PTPN1P18031 435 aaKnown RBP19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 BDNFP23560 247 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 AVPR1AP37288 418 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 RPS9P46781 194 aaKnown RBP19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 DLG4P78352 724 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 CYP27A1Q02318 531 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 NCOA4Q13772 614 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 ARHGAP29Q52LW3 1261 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 TXNDC8Q6A555 127 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 FRMD5Q7Z6J6 570 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 MON1AQ86VX9 555 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 CELF5Q8N6W0 485 aaKnown RBP19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 MAB21L3Q8N8X9 362 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 FAM3CQ92520 227 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 PCED1BQ96HM7 432 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 SPATA17Q96L03 361 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 CEP295NLQ96MC4 621 aa19.66■□□□□ 0.74
PRPF40A-209ENST00000486100 GFRA3O60609 400 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 VNN1O95497 513 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 GRIK1P39086 918 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 PLCB2Q00722 1185 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 SGSM1Q2NKQ1 1148 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 ZNF699Q32M78 642 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 ZACNQ401N2 412 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 ZNF667Q5HYK9 610 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 MDH1BQ5I0G3 518 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 FMR1NBQ8N0W7 255 aaPredicted RBP19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 ZNF687Q8N1G0 1237 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 MSANTD3Q96H12 275 aa19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 SMG9Q9H0W8 520 aaKnown RBP19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 C8orf33Q9H7E9 229 aaPredicted RBP19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 SPATA6Q9NWH7 488 aaPredicted RBP19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 THG1LQ9NWX6 298 aaKnown RBP19.65■□□□□ 0.74
PRPF40A-209ENST00000486100 A8MXQ7 604 aa19.64■□□□□ 0.73
PRPF40A-209ENST00000486100 NR2F2P24468 414 aa19.64■□□□□ 0.73
PRPF40A-209ENST00000486100 RPL13P26373 211 aaKnown RBP19.64■□□□□ 0.73
PRPF40A-209ENST00000486100 C1orf228Q6PIY5 440 aa19.64■□□□□ 0.73
PRPF40A-209ENST00000486100 SV2AQ7L0J3 742 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms