RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 FUBP3Q96I24 572 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNX5-213ENST00000486039 SNX25Q9H3E2 840 aa20.9■□□□□ 0.94
SNX5-213ENST00000486039 PRR23AA6NEV1 266 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 IKBKBO14920 756 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 RPL13P26373 211 aaKnown RBP20.89■□□□□ 0.93
SNX5-213ENST00000486039 CDC25CP30307 473 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 VAMP7P51809 220 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 STARD6P59095 220 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 PFKPQ01813 784 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 ZNF699Q32M78 642 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 EDRF1Q3B7T1 1238 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 COBLL1Q53SF7 1204 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 GPR158Q5T848 1215 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 C4orf50Q6ZRC1 276 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 GPIHBP1Q8IV16 184 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 ARID3BQ8IVW6 561 aaPredicted RBP20.89■□□□□ 0.93
SNX5-213ENST00000486039 ELOA2Q8IYF1 753 aaPredicted RBP20.89■□□□□ 0.93
SNX5-213ENST00000486039 SMARCE1Q969G3 411 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 DPEP3Q9H4B8 488 aa20.89■□□□□ 0.93
SNX5-213ENST00000486039 MAGEC2Q9UBF1 373 aaPredicted RBP20.89■□□□□ 0.93
SNX5-213ENST00000486039 HEPACAM2A8MVW5 462 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 SMC2O95347 1197 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 F11P03951 625 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 TRIM49P0CI25 452 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 TRIM49CP0CI26 452 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 CSH1P0DML2 217 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 CSH2P0DML3 217 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 PSMC3P17980 439 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 PSMC2P35998 433 aaKnown RBP20.88■□□□□ 0.93
SNX5-213ENST00000486039 CDH8P55286 799 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 RPL10AP62906 217 aaKnown RBP20.88■□□□□ 0.93
SNX5-213ENST00000486039 MLF2Q15773 248 aaPredicted RBP20.88■□□□□ 0.93
SNX5-213ENST00000486039 ARHGAP15Q53QZ3 475 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 ZNF667Q5HYK9 610 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 INTS8Q75QN2 995 aaKnown RBP20.88■□□□□ 0.93
SNX5-213ENST00000486039 FAM186BQ8IYM0 893 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 MYCBPAPQ8TBZ2 947 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 EEF2KMTQ96G04 330 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 PCED1BQ96HM7 432 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 TRMT61BQ9BVS5 477 aaKnown RBP20.88■□□□□ 0.93
SNX5-213ENST00000486039 TASP1Q9H6P5 420 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 SMYD3Q9H7B4 428 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 MAGED2Q9UNF1 606 aaPredicted RBP20.88■□□□□ 0.93
SNX5-213ENST00000486039 COL4A3Q01955 1670 aa20.88■□□□□ 0.93
SNX5-213ENST00000486039 SLC38A8A6NNN8 435 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 A8MXQ7 604 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 NOL4O94818 638 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 BDNFP23560 247 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 MAGEA11P43364 429 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 RAP1GAPP47736 663 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 NLRP12P59046 1061 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 MCCD1P59942 119 aaPredicted RBP20.87■□□□□ 0.93
SNX5-213ENST00000486039 CYP27A1Q02318 531 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 PPP3CAQ08209 521 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 MAPRE1Q15691 268 aaKnown RBP20.87■□□□□ 0.93
SNX5-213ENST00000486039 SGSM1Q2NKQ1 1148 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 MDH1BQ5I0G3 518 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 MFSD6LQ8IWD5 586 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 SCN4BQ8IWT1 228 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 DEPDC1BQ8WUY9 529 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 NKD2Q969F2 451 aaPredicted RBP20.87■□□□□ 0.93
SNX5-213ENST00000486039 LRRC3BQ96PB8 259 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 DDX23Q9BUQ8 820 aaKnown RBP20.87■□□□□ 0.93
SNX5-213ENST00000486039 SLC46A2Q9BY10 475 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 FOXQ1Q9C009 403 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 SDCBP2Q9H190 292 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 SIT1Q9Y3P8 196 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 MYO15AQ9UKN7 3530 aa20.87■□□□□ 0.93
SNX5-213ENST00000486039 HLA-DRAP01903 254 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 PTPN1P18031 435 aaKnown RBP20.86■□□□□ 0.93
SNX5-213ENST00000486039 GDI1P31150 447 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 GCLMP48507 274 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 PMS1P54277 932 aaKnown RBP20.86■□□□□ 0.93
SNX5-213ENST00000486039 PRKCQQ04759 706 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 ENPEPQ07075 957 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 SPOPLQ6IQ16 392 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 VSTM1Q6UX27 236 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 SCARA5Q6ZMJ2 495 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 ADSSL1Q8N142 457 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 E2F7Q96AV8 911 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 SHDQ96IW2 340 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 MYRFLQ96LU7 910 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 GCNAQ96QF7 691 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 BRD9Q9H8M2 597 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 HEBP1Q9NRV9 189 aa20.86■□□□□ 0.93
SNX5-213ENST00000486039 HOOK1Q9UJC3 728 aaKnown RBP20.86■□□□□ 0.93
SNX5-213ENST00000486039 SHISA7A6NL88 538 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 TADA3O75528 432 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 CLSTN1O94985 981 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 ASS1P00966 412 aaKnown RBP20.85■□□□□ 0.93
SNX5-213ENST00000486039 DCNP07585 359 aaKnown RBP20.85■□□□□ 0.93
SNX5-213ENST00000486039 KRT13P13646 458 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 WEE1P30291 646 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 ANKRD40Q6AI12 368 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 ISM2Q6H9L7 571 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 TAS1R2Q8TE23 839 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 TAF4BQ92750 862 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 DNASE1L2Q92874 299 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 IRF7Q92985 503 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 TRMT2BQ96GJ1 504 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms