RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 SERTAD3Q9UJW9 196 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 TOP3BO95985 862 aaKnown RBP5.1□□□□□ -1.59
GCFC2-209ENST00000486016 ATXN1LP0C7T5 689 aaKnown RBP5.1□□□□□ -1.59
GCFC2-209ENST00000486016 CYP2D6P10635 497 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 CCND1P24385 295 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 PTGER1P34995 402 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 CLCN2P51788 898 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 LOXL3P58215 753 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 PLS1Q14651 629 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 PGS1Q32NB8 556 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 LONRF3Q496Y0 759 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 CATSPERGQ6ZRH7 1159 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 ZNF804AQ7Z570 1209 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 CATIPQ7Z7H3 387 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 CHSY1Q86X52 802 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 ATG4AQ8WYN0 398 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 ZBTB9Q96C00 473 aa5.1□□□□□ -1.59
GCFC2-209ENST00000486016 THAP7Q9BT49 309 aaPredicted RBP5.1□□□□□ -1.59
GCFC2-209ENST00000486016 GTPBP4Q9BZE4 634 aaKnown RBP5.1□□□□□ -1.59
GCFC2-209ENST00000486016 SMIM22K7EJ46 135 aa5.09□□□□□ -1.59
GCFC2-209ENST00000486016 DTNBO60941 627 aa5.09□□□□□ -1.59
GCFC2-209ENST00000486016 FESP07332 822 aa5.09□□□□□ -1.59
GCFC2-209ENST00000486016 HOXA4Q00056 320 aaPredicted RBP5.09□□□□□ -1.59
GCFC2-209ENST00000486016 PCID2Q5JVF3 399 aa5.09□□□□□ -1.59
GCFC2-209ENST00000486016 C8orf58Q8NAV2 365 aa5.09□□□□□ -1.59
GCFC2-209ENST00000486016 RP9Q8TA86 221 aaKnown RBP5.09□□□□□ -1.59
GCFC2-209ENST00000486016 WASF1Q92558 559 aa5.09□□□□□ -1.59
GCFC2-209ENST00000486016 FCRL4Q96PJ5 515 aa5.09□□□□□ -1.59
GCFC2-209ENST00000486016 TTYH3Q9C0H2 523 aa5.09□□□□□ -1.59
GCFC2-209ENST00000486016 QSOX1O00391 747 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 PXNP49023 591 aaPredicted RBP5.08□□□□□ -1.6
GCFC2-209ENST00000486016 LILRA4P59901 499 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 DAZAP2Q15038 168 aaPredicted RBP5.08□□□□□ -1.6
GCFC2-209ENST00000486016 IQCB1Q15051 598 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 PARS2Q7L3T8 475 aaKnown RBP5.08□□□□□ -1.6
GCFC2-209ENST00000486016 GALNT16Q8N428 558 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 CELF5Q8N6W0 485 aaKnown RBP5.08□□□□□ -1.6
GCFC2-209ENST00000486016 GLG1Q92896 1179 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 MVB12AQ96EY5 273 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 PRSS22Q9GZN4 317 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 TCF7L1Q9HCS4 588 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 NRIP3Q9NQ35 241 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 NDRG4Q9ULP0 352 aaKnown RBP5.08□□□□□ -1.6
GCFC2-209ENST00000486016 GABRQQ9UN88 632 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 ADAMTS5Q9UNA0 930 aa5.08□□□□□ -1.6
GCFC2-209ENST00000486016 ZNF521Q96K83 1311 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 CYP2D7A0A087X1C5 515 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 SMIM35A0A1B0GVV1 85 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 A1L4Q6 167 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 SNUPNO95149 360 aaKnown RBP5.07□□□□□ -1.6
GCFC2-209ENST00000486016 UNC5CO95185 931 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 IGKV2-30P06310 120 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 CSF1RP07333 972 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 ENGP17813 658 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 AKAP5P24588 427 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 VIPR2P41587 438 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 SOX8P57073 446 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 ARHGAP40Q5TG30 622 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 SLC9A4Q6AI14 798 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 SLC2A7Q6PXP3 512 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 NAPRTQ6XQN6 538 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 Q6ZWC4 215 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 PLBD2Q8NHP8 589 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 CYP2W1Q8TAV3 490 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 SLC35A4Q96G79 324 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 RITA1Q96K30 269 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 ZC3H10Q96K80 434 aaKnown RBP5.07□□□□□ -1.6
GCFC2-209ENST00000486016 SMAD5Q99717 465 aaKnown RBP5.07□□□□□ -1.6
GCFC2-209ENST00000486016 PLEKHM1Q9Y4G2 1056 aa5.07□□□□□ -1.6
GCFC2-209ENST00000486016 H7C1Q1 480 aa5.06□□□□□ -1.6
GCFC2-209ENST00000486016 PPEF2O14830 753 aa5.06□□□□□ -1.6
GCFC2-209ENST00000486016 ALDH2P05091 517 aa5.06□□□□□ -1.6
GCFC2-209ENST00000486016 RGS7BPQ6MZT1 257 aaPredicted RBP5.06□□□□□ -1.6
GCFC2-209ENST00000486016 BRIX1Q8TDN6 353 aaKnown RBP5.06□□□□□ -1.6
GCFC2-209ENST00000486016 HSPBAP1Q96EW2 488 aa5.06□□□□□ -1.6
GCFC2-209ENST00000486016 MRGPRX1Q96LB2 322 aa5.06□□□□□ -1.6
GCFC2-209ENST00000486016 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
GCFC2-209ENST00000486016 H3BUI4 141 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 FCRL6Q6DN72 434 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 LAYNQ6UX15 382 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 TRIM72Q6ZMU5 477 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 LRRC71Q8N4P6 559 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 PCSK9Q8NBP7 692 aaKnown RBP5.05□□□□□ -1.6
GCFC2-209ENST00000486016 DENND1AQ8TEH3 1009 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 SOCS4Q8WXH5 440 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 HPS3Q969F9 1004 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 R3HDM4Q96D70 268 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 C5orf34Q96MH7 638 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 LENG8Q96PV6 779 aaPredicted RBP5.05□□□□□ -1.6
GCFC2-209ENST00000486016 ASB2Q96Q27 587 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 CAMKK2Q96RR4 588 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 MESP1Q9BRJ9 268 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 SPRTNQ9H040 489 aaPredicted RBP5.05□□□□□ -1.6
GCFC2-209ENST00000486016 GLOD4Q9HC38 313 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 PCDH12Q9NPG4 1184 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 XPR1Q9UBH6 696 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 PCDHA6Q9UN73 950 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 MED16Q9Y2X0 877 aa5.05□□□□□ -1.6
GCFC2-209ENST00000486016 hCG_1984214I3L0E3 225 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 BCAR3O75815 825 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms