RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 CCDC65Q8IXS2 484 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 ADGRF2Q8IZF7 708 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 TOP6BLQ8N6T0 577 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 OR5B17Q8NGF7 314 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 INTS4Q96HW7 963 aaKnown RBP20.65■□□□□ 0.9
COL27A1-205ENST00000485397 ABCB6Q9NP58 842 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 INTS13Q9NVM9 706 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.65■□□□□ 0.9
COL27A1-205ENST00000485397 FRYLO94915 3013 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 GABRDO14764 452 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 CNR2P34972 360 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 LHX1P48742 406 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 STK38Q15208 465 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 TMEM196Q5HYL7 178 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 CBWD2Q8IUF1 395 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 SPATA2LQ8IUW3 424 aaPredicted RBP20.64■□□□□ 0.89
COL27A1-205ENST00000485397 SCN4BQ8IWT1 228 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 ANKRD36BP1Q96IX9 119 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 ZSCAN16Q9H4T2 348 aaPredicted RBP20.64■□□□□ 0.89
COL27A1-205ENST00000485397 KIF9Q9HAQ2 790 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 TRPC7Q9HCX4 862 aa20.64■□□□□ 0.89
COL27A1-205ENST00000485397 DENND4CQ5VZ89 1909 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 DCDC2BA2VCK2 349 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 SOBPA7XYQ1 873 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 TRDMT1O14717 391 aaKnown RBP20.63■□□□□ 0.89
COL27A1-205ENST00000485397 STX6O43752 255 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 ATP2C2O75185 946 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 HOXD13P35453 343 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 CC2D1AQ6P1N0 951 aaPredicted RBP20.63■□□□□ 0.89
COL27A1-205ENST00000485397 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.63■□□□□ 0.89
COL27A1-205ENST00000485397 LINC00301Q8NCQ3 95 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 SPATA18Q8TC71 538 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 MYRFLQ96LU7 910 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 SLC22A12Q96S37 553 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 CYP2S1Q96SQ9 504 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 FBRSL1Q9HCM7 1045 aaKnown RBP20.63■□□□□ 0.89
COL27A1-205ENST00000485397 SEMA4GQ9NTN9 838 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 UXTQ9UBK9 157 aaPredicted RBP20.63■□□□□ 0.89
COL27A1-205ENST00000485397 NCOR2Q9Y618 2525 aa20.63■□□□□ 0.89
COL27A1-205ENST00000485397 ZNF233A6NK53 670 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 KIAA0391O15091 583 aaKnown RBP20.62■□□□□ 0.89
COL27A1-205ENST00000485397 EGFP01133 1207 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 LMO2P25791 158 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 PCSK1P29120 753 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 HOXA6P31267 233 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 PXNP49023 591 aaPredicted RBP20.62■□□□□ 0.89
COL27A1-205ENST00000485397 GRSF1Q12849 480 aaKnown RBP eCLIP20.62■□□□□ 0.891e-11■■□□□ 11.7
COL27A1-205ENST00000485397 ZNF268Q14587 947 aaPredicted RBP20.62■□□□□ 0.89
COL27A1-205ENST00000485397 E2F4Q16254 413 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 CFAP221Q4G0U5 840 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 NAIF1Q69YI7 327 aaPredicted RBP20.62■□□□□ 0.89
COL27A1-205ENST00000485397 FAM171BQ6P995 826 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 CEP68Q76N32 757 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 WDR5BQ86VZ2 330 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 TTC16Q8NEE8 873 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 KBTBD7Q8WVZ9 684 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 TRMT2BQ96GJ1 504 aaKnown RBP20.62■□□□□ 0.89
COL27A1-205ENST00000485397 HPDLQ96IR7 371 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 SYT15Q9BQS2 421 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 RTKNQ9BST9 563 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 TNMDQ9H2S6 317 aa20.62■□□□□ 0.89
COL27A1-205ENST00000485397 POLR3BQ9NW08 1133 aaPredicted RBP20.62■□□□□ 0.89
COL27A1-205ENST00000485397 TFIP11Q9UBB9 837 aaKnown RBP20.62■□□□□ 0.89
COL27A1-205ENST00000485397 R3HCC1Q9Y3T6 440 aaKnown RBP20.62■□□□□ 0.89
COL27A1-205ENST00000485397 OBSL1O75147 1896 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 LRP3O75074 770 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 TNNC2P02585 160 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 GALK1P51570 392 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 PSMC1P62191 440 aaKnown RBP20.61■□□□□ 0.89
COL27A1-205ENST00000485397 FAM160A1Q05DH4 1040 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 MYO1EQ12965 1108 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 MTF1Q14872 753 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 PDGFRLQ15198 375 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 STXBP4Q6ZWJ1 553 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 LIMS2Q7Z4I7 341 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 FAM160A2Q8N612 972 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-205ENST00000485397 FUBP3Q96I24 572 aaKnown RBP eCLIP20.61■□□□□ 0.89
COL27A1-205ENST00000485397 TRIM9Q9C026 710 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 KBTBD4Q9NVX7 518 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 HSPBP1Q9NZL4 362 aa20.61■□□□□ 0.89
COL27A1-205ENST00000485397 ZNF638Q14966 1978 aaKnown RBP20.61■□□□□ 0.89
COL27A1-205ENST00000485397 SPTLC2O15270 562 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 RNF40O75150 1001 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 PDGFRBP09619 1106 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 GJA4P35212 333 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 SURF1Q15526 300 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 ZNF77Q15935 545 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 CSRP2Q16527 193 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 DUOXA2Q1HG44 320 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 PRR23CQ6ZRP0 262 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 DPH6Q7L8W6 267 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 ARL14EPQ8N8R7 260 aaPredicted RBP20.6■□□□□ 0.89
COL27A1-205ENST00000485397 MYLPFQ96A32 169 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 DHX58Q96C10 678 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 CRTAC1Q9NQ79 661 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 GCNT4Q9P109 453 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 CDH9Q9ULB4 789 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 WNT6Q9Y6F9 365 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 ATG2BQ96BY7 2078 aa20.6■□□□□ 0.89
COL27A1-205ENST00000485397 SPTBN2O15020 2390 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms