RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 EPHA5P54756 1037 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 CYP4F8P98187 520 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 DPCR1Q3MIW9 517 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 CFAP221Q4G0U5 840 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 FILIP1Q7Z7B0 1213 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 LEMD2Q8NC56 503 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 B3GALNT2Q8NCR0 500 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 FBXL13Q8NEE6 735 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 SLC35C1Q96A29 364 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 FAM122AQ96E09 287 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 ZSWIM3Q96MP5 696 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 SRRTQ9BXP5 876 aaKnown RBP17.31■□□□□ 0.36
DDR1-246ENST00000485023 NIF3L1Q9GZT8 377 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 ATXN3LQ9H3M9 355 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 ABCB6Q9NP58 842 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 RAB20Q9NX57 234 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 ASB3Q9Y575 518 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 NOTCH4Q99466 2003 aa17.31■□□□□ 0.36
DDR1-246ENST00000485023 TMEM221A6NGB7 291 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 ANHXE9PGG2 379 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 M0R296 226 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 CLDN5O00501 218 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 GRIK1P39086 918 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 NDST1P52848 882 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 RPL10AP62906 217 aaKnown RBP17.3■□□□□ 0.36
DDR1-246ENST00000485023 SIGLEC14Q08ET2 396 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 MAPRE1Q15691 268 aaKnown RBP17.3■□□□□ 0.36
DDR1-246ENST00000485023 FAM78AQ5JUQ0 283 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 FRMD5Q7Z6J6 570 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 ACOT1Q86TX2 421 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 CREBRFQ8IUR6 639 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 GPIHBP1Q8IV16 184 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 SLC44A3Q8N4M1 653 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 FUBP3Q96I24 572 aaKnown RBP eCLIP17.3■□□□□ 0.36
DDR1-246ENST00000485023 LRFN3Q9BTN0 628 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 MED10Q9BTT4 135 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 ZNF518BQ9C0D4 1074 aa17.3■□□□□ 0.36
DDR1-246ENST00000485023 METTL14Q9HCE5 456 aaKnown RBP17.3■□□□□ 0.36
DDR1-246ENST00000485023 SLC38A8A6NNN8 435 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 CFHP08603 1231 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 FAM163BP0C2L3 166 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 CCDC130P13994 396 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 CACNA2D1P54289 1103 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 LRMPQ12912 555 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 GAREM2Q75VX8 874 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 MTSS1LQ765P7 747 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 UBALD2Q8IYN6 164 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 MLKLQ8NB16 471 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 GCNAQ96QF7 691 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 MED15Q96RN5 788 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 TWNKQ96RR1 684 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 ARID3AQ99856 593 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 B3GNT5Q9BYG0 378 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 BCO2Q9BYV7 579 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 GDE1Q9NZC3 331 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 RWDD2AQ9UIY3 292 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 DUSP12Q9UNI6 340 aa17.29■□□□□ 0.36
DDR1-246ENST00000485023 DOCK8Q8NF50 2099 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 GPR37L1O60883 481 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 PDGFBP01127 241 aaPredicted RBP17.28■□□□□ 0.36
DDR1-246ENST00000485023 HMGA1P17096 107 aaKnown RBP17.28■□□□□ 0.36
DDR1-246ENST00000485023 ANXA13P27216 316 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 FMO5P49326 533 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 NLRP12P59046 1061 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 WDR44Q5JSH3 913 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 GPR158Q5T848 1215 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 TANGO2Q6ICL3 276 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 FOXR2Q6PJQ5 311 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 HFE2Q6ZVN8 426 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 ZSCAN18Q8TBC5 510 aaPredicted RBP17.28■□□□□ 0.36
DDR1-246ENST00000485023 TATDN2Q93075 761 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 TNIP3Q96KP6 325 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 PLA2G2FQ9BZM2 168 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 IL21Q9HBE4 155 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 FAM49BQ9NUQ9 324 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 FBXL21Q9UKT6 434 aa17.28■□□□□ 0.36
DDR1-246ENST00000485023 F8VP50 259 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 MICAL2O94851 1124 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 CSH1P0DML2 217 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 CSH2P0DML3 217 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 FCARP24071 287 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 VIPR2P41587 438 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 MAGEA11P43364 429 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 MCCD1P59942 119 aaPredicted RBP17.27■□□□□ 0.36
DDR1-246ENST00000485023 IFRD2Q12894 506 aaPredicted RBP17.27■□□□□ 0.36
DDR1-246ENST00000485023 GRM2Q14416 872 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 TPD52L1Q16890 204 aaPredicted RBP17.27■□□□□ 0.36
DDR1-246ENST00000485023 ZNF394Q53GI3 561 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 ARHGAP15Q53QZ3 475 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 VSTM1Q6UX27 236 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 FAM35AQ86V20 835 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 C12orf29Q8N999 325 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 SMARCD2Q92925 531 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 ASIC4Q96FT7 647 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 CNOT6LQ96LI5 555 aaKnown RBP17.27■□□□□ 0.36
DDR1-246ENST00000485023 ASB16Q96NS5 453 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 ELOVL4Q9GZR5 314 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 KRT82Q9NSB4 513 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 TMEM30AQ9NV96 361 aa17.27■□□□□ 0.36
DDR1-246ENST00000485023 CA14Q9ULX7 337 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms