RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 DTX2Q86UW9 622 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 DENND1CQ8IV53 801 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 SLC35G2Q8TBE7 412 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 ATG4AQ8WYN0 398 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 REPS1Q96D71 796 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 TAAR9Q96RI9 348 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 CDH19Q9H159 772 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 SARS2Q9NP81 518 aaKnown RBP4.13□□□□□ -1.75
VPS50-216ENST00000484954 DLL3Q9NYJ7 618 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 ZIM2Q9NZV7 527 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 PADI4Q9UM07 663 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 PLEKHM1Q9Y4G2 1056 aa4.13□□□□□ -1.75
VPS50-216ENST00000484954 A0A088AWK7 358 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 DNAJC9-AS1A6NH13 148 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 H0YIZ8 118 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 H3BML4 177 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 GCOM1H8Y6P7 765 aaPredicted RBP4.12□□□□□ -1.75
VPS50-216ENST00000484954 FESP07332 822 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 ATXN1LP0C7T5 689 aaKnown RBP4.12□□□□□ -1.75
VPS50-216ENST00000484954 VCAM1P19320 739 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 SLC11A2P49281 568 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 SOX10P56693 466 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 LOXL3P58215 753 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 IGBP1P78318 339 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 IQCB1Q15051 598 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 LRRC41Q15345 812 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 FAM153CQ494X1 144 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 ICE2Q659A1 982 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 RGS7BPQ6MZT1 257 aaPredicted RBP4.12□□□□□ -1.75
VPS50-216ENST00000484954 ZNF551Q7Z340 670 aaPredicted RBP4.12□□□□□ -1.75
VPS50-216ENST00000484954 ZBTB34Q8NCN2 500 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 HASPINQ8TF76 798 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 ATRIPQ8WXE1 791 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 GLG1Q92896 1179 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 MACROD1Q9BQ69 325 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 PTDSS2Q9BVG9 487 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 ZMAT3Q9HA38 289 aaKnown RBP4.12□□□□□ -1.75
VPS50-216ENST00000484954 ATP6V0A4Q9HBG4 840 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 NMRK2Q9NPI5 230 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 XPR1Q9UBH6 696 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 PNMA8BQ9ULN7 279 aaPredicted RBP4.12□□□□□ -1.75
VPS50-216ENST00000484954 NDRG4Q9ULP0 352 aaKnown RBP4.12□□□□□ -1.75
VPS50-216ENST00000484954 MED16Q9Y2X0 877 aa4.12□□□□□ -1.75
VPS50-216ENST00000484954 LOC105371045A0A1W2PR82 267 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 TMEM233B4DJY2 109 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 TARM1B6A8C7 271 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 ERC2O15083 957 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 VNN1O95497 513 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 CSF1RP07333 972 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 ADORA2AP29274 412 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 PPIFP30405 207 aaKnown RBP4.11□□□□□ -1.75
VPS50-216ENST00000484954 CYP2C18P33260 490 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 ARFIP2P53365 341 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 FGL2Q14314 439 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 ZNF618Q5T7W0 954 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 SWSAP1Q6NVH7 229 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 LAYNQ6UX15 382 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 OVCH2Q7RTZ1 564 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 ANKS1AQ92625 1134 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 R3HDM4Q96D70 268 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 MTFMTQ96DP5 389 aaKnown RBP4.11□□□□□ -1.75
VPS50-216ENST00000484954 AIFM3Q96NN9 605 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 NELL2Q99435 816 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 TRIM54Q9BYV2 358 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 CXorf36Q9H7Y0 433 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 TBC1D30Q9Y2I9 924 aa4.11□□□□□ -1.75
VPS50-216ENST00000484954 A1L4Q6 167 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 IKBKBO14920 756 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 SLC16A3O15427 465 aaKnown RBP4.1□□□□□ -1.75
VPS50-216ENST00000484954 NXPH3O95157 252 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 PRKCGP05129 697 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 CELA2AP08217 269 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 KITP10721 976 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 HSPA6P17066 643 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 NDUFB7P17568 137 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 ENGP17813 658 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 VIPR2P41587 438 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 CYP4F2P78329 520 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 MYO1EQ12965 1108 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 PLAC9Q5JTB6 97 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 ZNF66Q6ZN08 573 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 DAAM2Q86T65 1068 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 SLC15A4Q8N697 577 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 DNAJC5GQ8N7S2 189 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 SCARB1Q8WTV0 552 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 MESP1Q9BRJ9 268 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 SH3BP4Q9P0V3 963 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.1□□□□□ -1.75
VPS50-216ENST00000484954 NOB1Q9ULX3 412 aaKnown RBP4.1□□□□□ -1.75
VPS50-216ENST00000484954 TMX2Q9Y320 296 aa4.1□□□□□ -1.75
VPS50-216ENST00000484954 A0A087WWL8 130 aa4.09□□□□□ -1.75
VPS50-216ENST00000484954 E2F8A0AVK6 867 aa4.09□□□□□ -1.75
VPS50-216ENST00000484954 LINC01548A6NM66 108 aa4.09□□□□□ -1.75
VPS50-216ENST00000484954 TISP43B9A030 160 aa4.09□□□□□ -1.75
VPS50-216ENST00000484954 SMIM22K7EJ46 135 aa4.09□□□□□ -1.75
VPS50-216ENST00000484954 TLR5O60602 858 aa4.09□□□□□ -1.75
VPS50-216ENST00000484954 FAM163BP0C2L3 166 aa4.09□□□□□ -1.75
VPS50-216ENST00000484954 ALDH9A1P49189 494 aa4.09□□□□□ -1.75
VPS50-216ENST00000484954 CTBP1Q13363 440 aa4.09□□□□□ -1.75
VPS50-216ENST00000484954 LY6KQ17RY6 165 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms