RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 LONRF3Q496Y0 759 aa5.62□□□□□ -1.51
SCAF11-207ENST00000484275 ARHGAP40Q5TG30 622 aa5.62□□□□□ -1.51
SCAF11-207ENST00000484275 SFRP4Q6FHJ7 346 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-207ENST00000484275 ZNF804AQ7Z570 1209 aa5.62□□□□□ -1.51
SCAF11-207ENST00000484275 GLG1Q92896 1179 aa5.62□□□□□ -1.51
SCAF11-207ENST00000484275 FSD1LQ9BXM9 530 aa5.62□□□□□ -1.51
SCAF11-207ENST00000484275 GTPBP4Q9BZE4 634 aaKnown RBP5.62□□□□□ -1.51
SCAF11-207ENST00000484275 SH2B3Q9UQQ2 575 aa5.62□□□□□ -1.51
SCAF11-207ENST00000484275 SMIM35A0A1B0GVV1 85 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 ERC2O15083 957 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 DTNBO60941 627 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 IGKV2-30P06310 120 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 ATXN1LP0C7T5 689 aaKnown RBP5.61□□□□□ -1.51
SCAF11-207ENST00000484275 CTGFP29279 349 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 PPIFP30405 207 aaKnown RBP5.61□□□□□ -1.51
SCAF11-207ENST00000484275 PXNP49023 591 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-207ENST00000484275 LOXL3P58215 753 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 PGS1Q32NB8 556 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 EMC10Q5UCC4 262 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 CATSPERGQ6ZRH7 1159 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 CYP2W1Q8TAV3 490 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 PTDSS2Q9BVG9 487 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 SPRTNQ9H040 489 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-207ENST00000484275 ADAMTS5Q9UNA0 930 aa5.61□□□□□ -1.51
SCAF11-207ENST00000484275 H3BUI4 141 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 KCNAB3O43448 404 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 UNC5CO95185 931 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 ONECUT2O95948 504 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 SOX8P57073 446 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 HOXA4Q00056 320 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-207ENST00000484275 IQCB1Q15051 598 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 SLC9A4Q6AI14 798 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 RGS7BPQ6MZT1 257 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-207ENST00000484275 LRRC71Q8N4P6 559 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 PNLDC1Q8NA58 520 aaKnown RBP5.6□□□□□ -1.51
SCAF11-207ENST00000484275 C8orf58Q8NAV2 365 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 R3HDM4Q96D70 268 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 FAM167AQ96KS9 214 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 PDGFCQ9NRA1 345 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 NDRG4Q9ULP0 352 aaKnown RBP5.6□□□□□ -1.51
SCAF11-207ENST00000484275 SPEF1Q9Y4P9 236 aa5.6□□□□□ -1.51
SCAF11-207ENST00000484275 A1L4Q6 167 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 hCG_1984214I3L0E3 225 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 BMP15O95972 392 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 PDE1AP54750 535 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 TMEM240Q5SV17 173 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 LAYNQ6UX15 382 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 BRIX1Q8TDN6 353 aaKnown RBP5.59□□□□□ -1.51
SCAF11-207ENST00000484275 DENND1AQ8TEH3 1009 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 SLC35A4Q96G79 324 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 RITA1Q96K30 269 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 C5orf34Q96MH7 638 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 KRTAP1-5Q9BYS1 174 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 PRSS22Q9GZN4 317 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 GLOD4Q9HC38 313 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 PCDHA6Q9UN73 950 aa5.59□□□□□ -1.51
SCAF11-207ENST00000484275 MRPS17Q9Y2R5 130 aaKnown RBP5.59□□□□□ -1.51
SCAF11-207ENST00000484275 KCNU1A8MYU2 1149 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 PPEF2O14830 753 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 SNUPNO95149 360 aaKnown RBP5.58□□□□□ -1.52
SCAF11-207ENST00000484275 PDE8BO95263 885 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 CSF1RP07333 972 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 GRPP07492 148 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 ARHGAP25P42331 645 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 DAZAP2Q15038 168 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-207ENST00000484275 FCRL6Q6DN72 434 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 TRIM72Q6ZMU5 477 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 Q6ZWC4 215 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 PARS2Q7L3T8 475 aaKnown RBP5.58□□□□□ -1.52
SCAF11-207ENST00000484275 GALNT16Q8N428 558 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 PLBD2Q8NHP8 589 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 RP9Q8TA86 221 aaKnown RBP5.58□□□□□ -1.52
SCAF11-207ENST00000484275 ASB2Q96Q27 587 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 THAP7Q9BT49 309 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-207ENST00000484275 TBC1D30Q9Y2I9 924 aa5.58□□□□□ -1.52
SCAF11-207ENST00000484275 CADPSQ9ULU8 1353 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 IL33O95760 270 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 ALDH2P05091 517 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 NPSP0C0P6 89 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 ZNF280BQ86YH2 543 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 XAGE5Q8WWM1 108 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 HSPBAP1Q96EW2 488 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 MVB12AQ96EY5 273 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 ELOVL5Q9NYP7 299 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 XPR1Q9UBH6 696 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 LUC7L2Q9Y383 392 aaKnown RBP5.57□□□□□ -1.52
SCAF11-207ENST00000484275 PLEKHM1Q9Y4G2 1056 aa5.57□□□□□ -1.52
SCAF11-207ENST00000484275 CYP2D7A0A087X1C5 515 aa5.56□□□□□ -1.52
SCAF11-207ENST00000484275 TJP3O95049 919 aa5.56□□□□□ -1.52
SCAF11-207ENST00000484275 VIPR2P41587 438 aa5.56□□□□□ -1.52
SCAF11-207ENST00000484275 E2F2Q14209 437 aa5.56□□□□□ -1.52
SCAF11-207ENST00000484275 ZIK1Q3SY52 487 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-207ENST00000484275 KHDC1LQ5JSQ8 128 aa5.56□□□□□ -1.52
SCAF11-207ENST00000484275 KIRREL2Q6UWL6 708 aa5.56□□□□□ -1.52
SCAF11-207ENST00000484275 TECPR1Q7Z6L1 1165 aa5.56□□□□□ -1.52
SCAF11-207ENST00000484275 ZC3H10Q96K80 434 aaKnown RBP5.56□□□□□ -1.52
SCAF11-207ENST00000484275 LENG8Q96PV6 779 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-207ENST00000484275 VPS16Q9H269 839 aa5.56□□□□□ -1.52
SCAF11-207ENST00000484275 CXorf36Q9H7Y0 433 aa5.56□□□□□ -1.52
SCAF11-207ENST00000484275 ANLNQ9NQW6 1124 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms