RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TASP1Q9H6P5 420 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 IL21Q9HBE4 155 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 MAGEC2Q9UBF1 373 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-213ENST00000482192 ZMYM5Q9UJ78 669 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 PCDHA5Q9Y5H7 936 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 A8MXQ7 604 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 GALR2O43603 387 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-213ENST00000482192 NOL4O94818 638 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 VNN1O95497 513 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 VIPR2P41587 438 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 PIK3CAP42336 1068 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 PRCPP42785 496 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 NLRP12P59046 1061 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 STARD6P59095 220 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 PRKCQQ04759 706 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 MLF2Q15773 248 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-213ENST00000482192 SLC44A4Q53GD3 710 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 C1orf220Q5T0J3 134 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 ARID3BQ8IVW6 561 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-213ENST00000482192 SCN4BQ8IWT1 228 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 IRF7Q92985 503 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 TRMT2BQ96GJ1 504 aaKnown RBP12.69□□□□□ -0.38
HMGN1-213ENST00000482192 PCED1BQ96HM7 432 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 CEP295NLQ96MC4 621 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 TSG101Q99816 390 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 MKNK1Q9BUB5 465 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 IMPG2Q9BZV3 1241 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 IRF2BPLQ9H1B7 796 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 BRD9Q9H8M2 597 aa12.69□□□□□ -0.38
HMGN1-213ENST00000482192 UXTQ9UBK9 157 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-213ENST00000482192 MAGED2Q9UNF1 606 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-213ENST00000482192 MYO10Q9HD67 2058 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 DOCK6Q96HP0 2047 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 SLC38A8A6NNN8 435 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 SOBPA7XYQ1 873 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 HEPACAM2A8MVW5 462 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 CETN3O15182 167 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 PI15O43692 258 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 ASS1P00966 412 aaKnown RBP12.68□□□□□ -0.38
HMGN1-213ENST00000482192 TRIM49P0CI25 452 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 TRIM49CP0CI26 452 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 PTPN1P18031 435 aaKnown RBP12.68□□□□□ -0.38
HMGN1-213ENST00000482192 DDX6P26196 483 aaKnown RBP eCLIP12.68□□□□□ -0.381e-5■■■□□ 17.8
HMGN1-213ENST00000482192 WEE1P30291 646 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 GDI1P31150 447 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 ANP32AP39687 249 aaKnown RBP12.68□□□□□ -0.38
HMGN1-213ENST00000482192 CYP4F8P98187 520 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 NHLH1Q02575 133 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 TCF15Q12870 199 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 SDHAF4Q5VUM1 108 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 TMEM150AQ86TG1 271 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 MFSD6LQ8IWD5 586 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 YAF2Q8IY57 180 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 B3GALNT2Q8NCR0 500 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 ERCC4Q92889 916 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-213ENST00000482192 TNIP3Q96KP6 325 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 MYRFLQ96LU7 910 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 DDX23Q9BUQ8 820 aaKnown RBP12.68□□□□□ -0.38
HMGN1-213ENST00000482192 ELOVL4Q9GZR5 314 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 DPEP3Q9H4B8 488 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 SMYD3Q9H7B4 428 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 TRPV5Q9NQA5 729 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 OBP2AQ9NY56 170 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 CHMP5Q9NZZ3 219 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 SIT1Q9Y3P8 196 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 NME7Q9Y5B8 376 aa12.68□□□□□ -0.38
HMGN1-213ENST00000482192 ZNF318Q5VUA4 2279 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 KANSL1LA0AUZ9 987 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 DPYSL4O14531 572 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 PSMA7O14818 248 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 ZNF263O14978 683 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 TRIM66O15016 1216 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 STX10O60499 249 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 HLA-DRAP01903 254 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 F11P03951 625 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 EPB41P11171 864 aaKnown RBP12.67□□□□□ -0.38
HMGN1-213ENST00000482192 BDNFP23560 247 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 ANXA13P27216 316 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 GTF2H1P32780 548 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 GRIK1P39086 918 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 PPP1R2P41236 205 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 RAP1GAPP47736 663 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 GCLMP48507 274 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 CDH8P55286 799 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 LRRC63Q05C16 580 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 PPP3CAQ08209 521 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 FCHO2Q0JRZ9 810 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 STIM1Q13586 685 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 SCARA5Q6ZMJ2 495 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 TPRG1Q6ZUI0 275 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 CCDC105Q8IYK2 499 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 CMTM8Q8IZV2 173 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 ADSSL1Q8N142 457 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 CCDC150Q8NCX0 1101 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 STKLD1Q8NE28 680 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 PJA1Q8NG27 643 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 MRPS31Q92665 395 aaKnown RBP12.67□□□□□ -0.38
HMGN1-213ENST00000482192 RSPRY1Q96DX4 576 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 SPATA17Q96L03 361 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms