RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 VSTM4Q8IW00 320 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 NKAPQ8N5F7 415 aaKnown RBP9.35□□□□□ -0.91
PDCD4-206ENST00000481353 LINC00301Q8NCQ3 95 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 PIK3C3Q8NEB9 887 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 NGDNQ8NEJ9 315 aaKnown RBP9.35□□□□□ -0.91
PDCD4-206ENST00000481353 ATXN2LQ8WWM7 1075 aaKnown RBP9.35□□□□□ -0.91
PDCD4-206ENST00000481353 USP28Q96RU2 1077 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 SYT3Q9BQG1 590 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 GORASP1Q9BQQ3 440 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 BCO1Q9HAY6 547 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 KIAA1586Q9HCI6 787 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 PNPOQ9NVS9 261 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 GPRC5BQ9NZH0 403 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 TUBE1Q9UJT0 475 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 CORO2BQ9UQ03 480 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 LRCH1Q9Y2L9 728 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 VWA7Q9Y334 891 aa9.35□□□□□ -0.91
PDCD4-206ENST00000481353 MAP3K15Q6ZN16 1313 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 ANKARQ7Z5J8 1434 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 A0A0D9SFI3 127 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 A0A1B0GUL7 405 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 A0A1W2PPL8 197 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 BTBD11A6QL63 1104 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 ISM1B1AKI9 464 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 MYO1FO00160 1098 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 JAK2O60674 1132 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 PRAMEF4O60810 478 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 CYP7B1O75881 506 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 SASH1O94885 1247 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 ZNF202O95125 648 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 KRT1P04264 644 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 OAS2P29728 719 aaKnown RBP9.34□□□□□ -0.91
PDCD4-206ENST00000481353 ADCY8P40145 1251 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 ZNF543Q08ER8 600 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 EIF4HQ15056 248 aaKnown RBP9.34□□□□□ -0.91
PDCD4-206ENST00000481353 HSP90B2PQ58FF3 399 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 CPLX2Q6PUV4 134 aaKnown RBP9.34□□□□□ -0.91
PDCD4-206ENST00000481353 REXO1L1PQ8IX06 675 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 IFI44Q8TCB0 444 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 ZNF480Q8WV37 535 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 UNKQ9C0B0 810 aaKnown RBP9.34□□□□□ -0.91
PDCD4-206ENST00000481353 BOLA2Q9H3K6 86 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 GOLPH3LQ9H4A5 285 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 GPR108Q9NPR9 543 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 ABCF2Q9UG63 623 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDCD4-206ENST00000481353 MAP3K2Q9Y2U5 619 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 PCDHA5Q9Y5H7 936 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 PCDHA3Q9Y5H8 950 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 MRC1P22897 1456 aa9.34□□□□□ -0.91
PDCD4-206ENST00000481353 SALL1Q9NSC2 1324 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 USP54Q70EL1 1684 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 KRTAP4-8A0A0G2JLE6 195 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 H0Y858 1186 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 DDX3XO00571 662 aaKnown RBP eCLIP9.33□□□□□ -0.92
PDCD4-206ENST00000481353 MAP2K7O14733 419 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 CDKL5O76039 1030 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 FTH1P19P0C7X4 201 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 HNRNPLP14866 589 aaKnown RBP eCLIP9.33□□□□□ -0.92
PDCD4-206ENST00000481353 CAPN2P17655 700 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 WNT3AP56704 352 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 TLE1Q04724 770 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 LDHDQ86WU2 507 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 CPXCR1Q8N123 301 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 LINC00482Q8N8I6 264 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 TRIML1Q8N9V2 468 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 KYQ8NBH2 561 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 OR7D4Q8NG98 312 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 CTCFLQ8NI51 663 aaPredicted RBP9.33□□□□□ -0.92
PDCD4-206ENST00000481353 CCDC51Q96ER9 411 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 C8orf76Q96K31 380 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 ZSWIM3Q96MP5 696 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 DIRC2Q96SL1 478 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 BAG1Q99933 345 aaPredicted RBP9.33□□□□□ -0.92
PDCD4-206ENST00000481353 VRK1Q99986 396 aaPredicted RBP9.33□□□□□ -0.92
PDCD4-206ENST00000481353 C11orf84Q9BUA3 381 aaPredicted RBP9.33□□□□□ -0.92
PDCD4-206ENST00000481353 CARD6Q9BX69 1037 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 VPS11Q9H270 941 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 CERS4Q9HA82 394 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 MED4Q9NPJ6 270 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 MYO1AQ9UBC5 1043 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 PPP2R2CQ9Y2T4 447 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 SNX13Q9Y5W8 968 aa9.33□□□□□ -0.92
PDCD4-206ENST00000481353 MED1Q15648 1581 aaPredicted RBP9.33□□□□□ -0.92
PDCD4-206ENST00000481353 NPHP1O15259 732 aa9.32□□□□□ -0.92
PDCD4-206ENST00000481353 POLR3GO15318 223 aaPredicted RBP9.32□□□□□ -0.92
PDCD4-206ENST00000481353 FARP2O94887 1054 aaPredicted RBP9.32□□□□□ -0.92
PDCD4-206ENST00000481353 COL6A1P12109 1028 aa9.32□□□□□ -0.92
PDCD4-206ENST00000481353 PFKLP17858 780 aa9.32□□□□□ -0.92
PDCD4-206ENST00000481353 MALP21145 153 aa9.32□□□□□ -0.92
PDCD4-206ENST00000481353 PPM1AP35813 382 aa9.32□□□□□ -0.92
PDCD4-206ENST00000481353 SREBF1P36956 1147 aa9.32□□□□□ -0.92
PDCD4-206ENST00000481353 IL6STP40189 918 aaPredicted RBP9.32□□□□□ -0.92
PDCD4-206ENST00000481353 MAGEA9P43362 315 aa9.32□□□□□ -0.92
PDCD4-206ENST00000481353 SESN2P58004 480 aaPredicted RBP9.32□□□□□ -0.92
PDCD4-206ENST00000481353 GNG11P61952 73 aa9.32□□□□□ -0.92
PDCD4-206ENST00000481353 SRSF3P84103 164 aaKnown RBP9.32□□□□□ -0.92
PDCD4-206ENST00000481353 SLC39A14Q15043 492 aa9.32□□□□□ -0.92
PDCD4-206ENST00000481353 FAM209BQ5JX69 171 aa9.32□□□□□ -0.92
PDCD4-206ENST00000481353 GPR155Q7Z3F1 870 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms