RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 PAQR9Q6ZVX9 377 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 GAREM2Q75VX8 874 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 FRMD5Q7Z6J6 570 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 ENOX1Q8TC92 643 aaKnown RBP13.05□□□□□ -0.32
PTPRF-213ENST00000481019 SPPL2BQ8TCT7 592 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 WHAMMQ8TF30 809 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 FGF14Q92915 247 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 ACSF2Q96CM8 615 aaPredicted RBP13.05□□□□□ -0.32
PTPRF-213ENST00000481019 MCRS1Q96EZ8 462 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 PCED1BQ96HM7 432 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 ZNF512Q96ME7 567 aaPredicted RBP13.05□□□□□ -0.32
PTPRF-213ENST00000481019 ARID3AQ99856 593 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 B3GNT5Q9BYG0 378 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 RBSNQ9H1K0 784 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 KCNK12Q9HB15 430 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 IL21Q9HBE4 155 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 AVENQ9NQS1 362 aaPredicted RBP13.05□□□□□ -0.32
PTPRF-213ENST00000481019 RAB20Q9NX57 234 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 HSFX1Q9UBD0 423 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 CDH7Q9ULB5 785 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 MRPS23Q9Y3D9 190 aaKnown RBP13.05□□□□□ -0.32
PTPRF-213ENST00000481019 TECTAO75443 2155 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 NCANO14594 1321 aa13.05□□□□□ -0.32
PTPRF-213ENST00000481019 A8MXQ7 604 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 ANHXE9PGG2 379 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 NARSO43776 548 aaKnown RBP13.04□□□□□ -0.32
PTPRF-213ENST00000481019 FAM163BP0C2L3 166 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 BDNFP23560 247 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 FMO5P49326 533 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 NDST1P52848 882 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 EPHB3P54753 998 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 ZXDAP98168 799 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 MYL5Q02045 173 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 CYP27A1Q02318 531 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 HTR4Q13639 388 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 TEAD2Q15562 447 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 TPD52L1Q16890 204 aaPredicted RBP13.04□□□□□ -0.32
PTPRF-213ENST00000481019 CCDC40Q4G0X9 1142 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 TMEM150AQ86TG1 271 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 ACOT1Q86TX2 421 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 SPATA2LQ8IUW3 424 aaPredicted RBP13.04□□□□□ -0.32
PTPRF-213ENST00000481019 GPIHBP1Q8IV16 184 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 TRIM59Q8IWR1 403 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 B3GALNT2Q8NCR0 500 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 RNF214Q8ND24 703 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 FBXL13Q8NEE6 735 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 MYCBPAPQ8TBZ2 947 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 C2orf15Q8WU43 125 aaKnown RBP13.04□□□□□ -0.32
PTPRF-213ENST00000481019 TAF4BQ92750 862 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 PSMG2Q969U7 264 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 PLA2G2FQ9BZM2 168 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 ZNF518BQ9C0D4 1074 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 ELOVL4Q9GZR5 314 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 NIF3L1Q9GZT8 377 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■■□□ 17.8
PTPRF-213ENST00000481019 COQ4Q9Y3A0 265 aa13.04□□□□□ -0.32
PTPRF-213ENST00000481019 COL4A3Q01955 1670 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 A0A1W2PRU2 124 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 CCDC130P13994 396 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 CD58P19256 250 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 FCARP24071 287 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 TUFMP49411 452 aaKnown RBP13.03□□□□□ -0.32
PTPRF-213ENST00000481019 MARSP56192 900 aaKnown RBP13.03□□□□□ -0.32
PTPRF-213ENST00000481019 SMARCB1Q12824 385 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 LRMPQ12912 555 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 PLD1Q13393 1074 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 NFE2Q16621 373 aaPredicted RBP13.03□□□□□ -0.32
PTPRF-213ENST00000481019 CFAP221Q4G0U5 840 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 IQCEQ6IPM2 695 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 PDZD4Q76G19 769 aaPredicted RBP13.03□□□□□ -0.32
PTPRF-213ENST00000481019 SCN4BQ8IWT1 228 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 ELMOD1Q8N336 334 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 C12orf29Q8N999 325 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 ANKRD20A12PQ8NF67 263 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 EDAQ92838 391 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 KXD1Q9BQD3 176 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 METTL14Q9HCE5 456 aaKnown RBP13.03□□□□□ -0.32
PTPRF-213ENST00000481019 ABCB6Q9NP58 842 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 ASAH2Q9NR71 780 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 MAGEC2Q9UBF1 373 aaPredicted RBP13.03□□□□□ -0.32
PTPRF-213ENST00000481019 NUMBLQ9Y6R0 609 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 GREB1Q4ZG55 1949 aa13.03□□□□□ -0.32
PTPRF-213ENST00000481019 OBSL1O75147 1896 aa13.02□□□□□ -0.32
PTPRF-213ENST00000481019 SLC38A8A6NNN8 435 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 STX10O60499 249 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 TADA3O75528 432 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 TPM3P06753 285 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 PRKCSHP14314 528 aaPredicted RBP13.02□□□□□ -0.33
PTPRF-213ENST00000481019 GABRR2P28476 465 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 MAGEA11P43364 429 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 USP46P62068 366 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 CYP4F8P98187 520 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 INCA1Q0VD86 236 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 KCNH2Q12809 1159 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 IQCB1Q15051 598 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 HSP90AA4PQ58FG1 418 aa13.02□□□□□ -0.33
PTPRF-213ENST00000481019 FAM78AQ5JUQ0 283 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms