RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 MRPL45Q9BRJ2 306 aaKnown RBP18.18■□□□□ 0.5
HSPG2-209ENST00000480900 DDX23Q9BUQ8 820 aaKnown RBP18.18■□□□□ 0.5
HSPG2-209ENST00000480900 TASP1Q9H6P5 420 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 BRD9Q9H8M2 597 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 NXF1Q9UBU9 619 aaKnown RBP18.18■□□□□ 0.5
HSPG2-209ENST00000480900 HOOK1Q9UJC3 728 aaKnown RBP18.18■□□□□ 0.5
HSPG2-209ENST00000480900 HELZP42694 1942 aaKnown RBP18.17■□□□□ 0.5
HSPG2-209ENST00000480900 AKAP3O75969 853 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 VNN1O95497 513 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 PDGFRBP09619 1106 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 GPR15P49685 360 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 VAMP7P51809 220 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 DDR2Q16832 855 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 COBLL1Q53SF7 1204 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 ZNF667Q5HYK9 610 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 C1orf220Q5T0J3 134 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 VSTM1Q6UX27 236 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 INTS8Q75QN2 995 aaKnown RBP18.17■□□□□ 0.5
HSPG2-209ENST00000480900 ARID3BQ8IVW6 561 aaPredicted RBP18.17■□□□□ 0.5
HSPG2-209ENST00000480900 MFSD6LQ8IWD5 586 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 CCDC105Q8IYK2 499 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 SMYD4Q8IYR2 804 aaPredicted RBP18.17■□□□□ 0.5
HSPG2-209ENST00000480900 OR6B3Q8NGW1 331 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 SPATA20Q8TB22 786 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 MYCBPAPQ8TBZ2 947 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 IRF7Q92985 503 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 MYLPFQ96A32 169 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 TRMT2BQ96GJ1 504 aaKnown RBP18.17■□□□□ 0.5
HSPG2-209ENST00000480900 CEP295NLQ96MC4 621 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 GTPBP4Q9BZE4 634 aaKnown RBP18.17■□□□□ 0.5
HSPG2-209ENST00000480900 TRPV5Q9NQA5 729 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 MAGEC2Q9UBF1 373 aaPredicted RBP18.17■□□□□ 0.5
HSPG2-209ENST00000480900 UXTQ9UBK9 157 aaPredicted RBP18.17■□□□□ 0.5
HSPG2-209ENST00000480900 COL4A3Q01955 1670 aa18.17■□□□□ 0.5
HSPG2-209ENST00000480900 PATJQ8NI35 1801 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 SOBPA7XYQ1 873 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 HEPACAM2A8MVW5 462 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 NOL4O94818 638 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 F11P03951 625 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 PSMC2P35998 433 aaKnown RBP18.16■□□□□ 0.5
HSPG2-209ENST00000480900 NLRP12P59046 1061 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 CYP4F8P98187 520 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 ADAM9Q13443 819 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 ZNF658Q5TYW1 1059 aaPredicted RBP18.16■□□□□ 0.5
HSPG2-209ENST00000480900 SDHAF4Q5VUM1 108 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 SV2AQ7L0J3 742 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 TMEM150AQ86TG1 271 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 ELOA2Q8IYF1 753 aaPredicted RBP18.16■□□□□ 0.5
HSPG2-209ENST00000480900 FAM186BQ8IYM0 893 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 PJA1Q8NG27 643 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 TAF4BQ92750 862 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 SMARCE1Q969G3 411 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 MYRFLQ96LU7 910 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 OBP2AQ9NY56 170 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 SIT1Q9Y3P8 196 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 NME7Q9Y5B8 376 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 PCDHA5Q9Y5H7 936 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 RIF1Q5UIP0 2472 aaKnown RBP18.16■□□□□ 0.5
HSPG2-209ENST00000480900 NCANO14594 1321 aa18.16■□□□□ 0.5
HSPG2-209ENST00000480900 FANCMQ8IYD8 2048 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 KANSL1LA0AUZ9 987 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 SLC38A8A6NNN8 435 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 KRT13P13646 458 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 P4HA1P13674 534 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 DDX6P26196 483 aaKnown RBP eCLIP18.15■□□□□ 0.5
HSPG2-209ENST00000480900 GDI1P31150 447 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 PRCPP42785 496 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 FCHO2Q0JRZ9 810 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 SGSM1Q2NKQ1 1148 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 MDH1BQ5I0G3 518 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 SCN4BQ8IWT1 228 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 DTWD2Q8NBA8 298 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 RSPRY1Q96DX4 576 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 PCED1BQ96HM7 432 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 OSBPL6Q9BZF3 934 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 FOXQ1Q9C009 403 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 SMYD3Q9H7B4 428 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 HEBP1Q9NRV9 189 aa18.15■□□□□ 0.5
HSPG2-209ENST00000480900 MAGED2Q9UNF1 606 aaPredicted RBP18.15■□□□□ 0.5
HSPG2-209ENST00000480900 A8MXQ7 604 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 DPYSL4O14531 572 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 ZNF263O14978 683 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 CLSTN1O94985 981 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 ASS1P00966 412 aaKnown RBP18.14■□□□□ 0.49
HSPG2-209ENST00000480900 HLA-DRAP01903 254 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 PTPN1P18031 435 aaKnown RBP18.14■□□□□ 0.49
HSPG2-209ENST00000480900 BDNFP23560 247 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 MCCD1P59942 119 aaPredicted RBP18.14■□□□□ 0.49
HSPG2-209ENST00000480900 CYP27A1Q02318 531 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 TPRG1Q6ZUI0 275 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 B3GALNT2Q8NCR0 500 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 STKLD1Q8NE28 680 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 SPATA17Q96L03 361 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 SLC46A2Q9BY10 475 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 DLGAP2Q9P1A6 1054 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 FAM186AA6NE01 2351 aa18.14■□□□□ 0.49
HSPG2-209ENST00000480900 H0Y858 1186 aa18.13■□□□□ 0.49
HSPG2-209ENST00000480900 ARNTLO00327 626 aa18.13■□□□□ 0.49
HSPG2-209ENST00000480900 TRIM66O15016 1216 aa18.13■□□□□ 0.49
HSPG2-209ENST00000480900 CHADO15335 359 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms