RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 ELMOD1Q8N336 334 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 GPR152Q8TDT2 470 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 FUBP3Q96I24 572 aaKnown RBP eCLIP16.12■□□□□ 0.17
ABCF3-213ENST00000480539 NECTIN4Q96NY8 510 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 CORO1BQ9BR76 489 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 MED10Q9BTT4 135 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 NT5C1AQ9BXI3 368 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 ZNF518BQ9C0D4 1074 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 ELOVL4Q9GZR5 314 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 ABCB6Q9NP58 842 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 CEP72Q9P209 647 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 GTPBP10A4D1E9 387 aaKnown RBP16.11■□□□□ 0.17
ABCF3-213ENST00000480539 TPM2P07951 284 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 CDK11BP21127 795 aaKnown RBP16.11■□□□□ 0.17
ABCF3-213ENST00000480539 TUFMP49411 452 aaKnown RBP16.11■□□□□ 0.17
ABCF3-213ENST00000480539 EPHB3P54753 998 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 YWHAEP62258 255 aaKnown RBP16.11■□□□□ 0.17
ABCF3-213ENST00000480539 DDR2Q16832 855 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 PABPC1LQ4VXU2 614 aaKnown RBP16.11■□□□□ 0.17
ABCF3-213ENST00000480539 PHLDB3Q6NSJ2 640 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 CYP26C1Q6V0L0 522 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 LUZP1Q86V48 1076 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 SCN4BQ8IWT1 228 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 UBR7Q8N806 425 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 C12orf29Q8N999 325 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 ANKRD20A12PQ8NF67 263 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 FAM200AQ8TCP9 573 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 ADAMTS19Q8TE59 1207 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 GIPC2Q8TF65 315 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 FAXDC2Q96IV6 333 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 NECAB3Q96P71 396 aaPredicted RBP16.11■□□□□ 0.17
ABCF3-213ENST00000480539 PHF7Q9BWX1 381 aaPredicted RBP16.11■□□□□ 0.17
ABCF3-213ENST00000480539 B3GNT5Q9BYG0 378 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 WDR6Q9NNW5 1121 aaKnown RBP16.11■□□□□ 0.17
ABCF3-213ENST00000480539 KRT82Q9NSB4 513 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 DNMT3BQ9UBC3 853 aaKnown RBP16.11■□□□□ 0.17
ABCF3-213ENST00000480539 HSFX1Q9UBD0 423 aa16.11■□□□□ 0.17
ABCF3-213ENST00000480539 LIMA1Q9UHB6 759 aaKnown RBP16.11■□□□□ 0.17
ABCF3-213ENST00000480539 PTPRDP23468 1912 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 RHOP08100 348 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 PON1P27169 355 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 ADORA2BP29275 332 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 CACNA2D1P54289 1103 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 GCNT1Q02742 428 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 VEPH1Q14D04 833 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 HS6ST3Q8IZP7 471 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 SLC4A11Q8NBS3 891 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 SLC2A14Q8TDB8 520 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 RPGRIP1Q96KN7 1286 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 KREMEN1Q96MU8 473 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 LSM14BQ9BX40 385 aaKnown RBP16.1■□□□□ 0.17
ABCF3-213ENST00000480539 SIX2Q9NPC8 291 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 TMEM30AQ9NV96 361 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 APEX2Q9UBZ4 518 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 AJAP1Q9UKB5 411 aaPredicted RBP16.1■□□□□ 0.17
ABCF3-213ENST00000480539 PCDHB4Q9Y5E5 795 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 ATP8B3O60423 1300 aa16.1■□□□□ 0.17
ABCF3-213ENST00000480539 TCF20Q9UGU0 1960 aaKnown RBP16.09■□□□□ 0.17
ABCF3-213ENST00000480539 C5orf42Q9H799 3197 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 NRG2O14511 850 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-213ENST00000480539 TRIM21P19474 475 aaKnown RBP16.09■□□□□ 0.17
ABCF3-213ENST00000480539 ACO1P21399 889 aaKnown RBP16.09■□□□□ 0.17
ABCF3-213ENST00000480539 FSHRP23945 695 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 MAGEA11P43364 429 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 RAD23BP54727 409 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 ZP2Q05996 745 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 SLC5A9Q2M3M2 681 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 IQCEQ6IPM2 695 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 TMEM270Q6UE05 265 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 LRSAM1Q6UWE0 723 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 TMC8Q8IU68 726 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 ADHFE1Q8IWW8 467 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 FUKQ8N0W3 1084 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 CRYBG2Q8N1P7 616 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 TTC39CQ8N584 583 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 ING5Q8WYH8 240 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 PSMG2Q969U7 264 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 TCEAL4Q96EI5 215 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 TMEM176AQ96HP8 235 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 ZNF512Q96ME7 567 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-213ENST00000480539 TSPY26PQ9H489 355 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 ZNF334Q9HCZ1 680 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-213ENST00000480539 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-213ENST00000480539 ASAH2Q9NR71 780 aa16.09■□□□□ 0.17
ABCF3-213ENST00000480539 LGALS16A8MUM7 142 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 C2CD4DB7Z1M9 353 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 F8VP50 259 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 AP1G2O75843 785 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 CALCAP01258 141 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 MYL4P12829 197 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 CEBPBP17676 345 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 PTPN2P17706 415 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 GRIK1P39086 918 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 CCR2P41597 374 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 KLK7P49862 253 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 RPL10AP62906 217 aaKnown RBP16.08■□□□□ 0.16
ABCF3-213ENST00000480539 MTMR3Q13615 1198 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 ARHGAP44Q17R89 818 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 FKBP15Q5T1M5 1219 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 VSTM1Q6UX27 236 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms