RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PHF13Q86YI8 300 aaPredicted RBP18.62■□□□□ 0.57
UPF3A-206ENST00000480362 RNF168Q8IYW5 571 aaPredicted RBP18.62■□□□□ 0.57
UPF3A-206ENST00000480362 MCOLN2Q8IZK6 566 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 FUKQ8N0W3 1084 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 ANKRD52Q8NB46 1076 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 MYCBPAPQ8TBZ2 947 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 SECISBP2LQ93073 1101 aaKnown RBP18.62■□□□□ 0.57
UPF3A-206ENST00000480362 PKMYT1Q99640 499 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 VN1R3Q9BXE9 311 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 B3GNT5Q9BYG0 378 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 TSGA10Q9BZW7 698 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 THAP2Q9H0W7 228 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 CYTH4Q9UIA0 394 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 GUCA1BQ9UMX6 200 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 ATP8B3O60423 1300 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 VWA8A3KMH1 1905 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 LINC00271P0C7V0 271 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 PPM1AP35813 382 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 CDR1P51861 262 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 GPC5P78333 572 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 ZNF280DQ6N043 979 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 MMS22LQ6ZRQ5 1243 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 CTNNBL1Q8WYA6 563 aaPredicted RBP18.61■□□□□ 0.57
UPF3A-206ENST00000480362 CLP1Q92989 425 aaKnown RBP18.61■□□□□ 0.57
UPF3A-206ENST00000480362 PCED1BQ96HM7 432 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 C11orf70Q9BRQ4 267 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 ZCWPW1Q9H0M4 648 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 TMLHEQ9NVH6 421 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 ADAM22Q9P0K1 906 aa18.61■□□□□ 0.57
UPF3A-206ENST00000480362 MKI67P46013 3256 aaKnown RBP18.61■□□□□ 0.57
UPF3A-206ENST00000480362 KIAA1671Q9BY89 1806 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 OR6C75A6NL08 312 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 GRXCR1A8MXD5 290 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 SOD2P04179 222 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 OR4Q2P0C623 313 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 MMP8P22894 467 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 BCAT1P54687 386 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 PLCB3Q01970 1234 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 PDE4CQ08493 712 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 BST2Q10589 180 aaKnown RBP18.6■□□□□ 0.57
UPF3A-206ENST00000480362 PTP4A2Q12974 167 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 MAPRE1Q15691 268 aaKnown RBP18.6■□□□□ 0.57
UPF3A-206ENST00000480362 C2CD6Q53TS8 623 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 KIAA1841Q6NSI8 718 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 PRSS55Q6UWB4 352 aaPredicted RBP18.6■□□□□ 0.57
UPF3A-206ENST00000480362 ANKS3Q6ZW76 656 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 MON1BQ7L1V2 547 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 DDX53Q86TM3 631 aaKnown RBP18.6■□□□□ 0.57
UPF3A-206ENST00000480362 ERICH1Q86X53 443 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 DCP1BQ8IZD4 617 aaKnown RBP18.6■□□□□ 0.57
UPF3A-206ENST00000480362 MYLPFQ96A32 169 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 ZNF653Q96CK0 615 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 ARHGEF26Q96DR7 871 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 VCPIP1Q96JH7 1222 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 HERC2P3Q9BVR0 1158 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 UBE2OQ9C0C9 1292 aaKnown RBP18.6■□□□□ 0.57
UPF3A-206ENST00000480362 CHST7Q9NS84 486 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 PAXBP1Q9Y5B6 917 aa18.6■□□□□ 0.57
UPF3A-206ENST00000480362 BTNL10A8MVZ5 291 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 TBC1D4O60343 1298 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 FGF18O76093 207 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 SETSIPP0DME0 302 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 KRT17Q04695 432 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 C1QBPQ07021 282 aaKnown RBP18.59■□□□□ 0.57
UPF3A-206ENST00000480362 SLC39A12Q504Y0 691 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 FAM35AQ86V20 835 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 SLC35F5Q8WV83 523 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 RIN2Q8WYP3 895 aaPredicted RBP18.59■□□□□ 0.57
UPF3A-206ENST00000480362 TRIM11Q96F44 468 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 NOX5Q96PH1 765 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 GDF15Q99988 308 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 DUSP16Q9BY84 665 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 OXCT2Q9BYC2 517 aaPredicted RBP18.59■□□□□ 0.57
UPF3A-206ENST00000480362 MYO1AQ9UBC5 1043 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 CNOT8Q9UFF9 292 aaKnown RBP18.59■□□□□ 0.57
UPF3A-206ENST00000480362 SALL4Q9UJQ4 1053 aa18.59■□□□□ 0.57
UPF3A-206ENST00000480362 MACROD2A1Z1Q3 448 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 H0YGN5 161 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 TULP2O00295 520 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 ATMINO43313 823 aaPredicted RBP18.58■□□□□ 0.56
UPF3A-206ENST00000480362 CYP1A2P05177 515 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 CALB1P05937 261 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 MYBL1P10243 752 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 MYOGP15173 224 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 BMPR1AP36894 532 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 PDCLQ13371 301 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 PTPN14Q15678 1187 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 PTPN20Q4JDL3 420 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 LIN9Q5TKA1 542 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 FAM109BQ6ICB4 259 aaPredicted RBP18.58■□□□□ 0.56
UPF3A-206ENST00000480362 PMF1Q6P1K2 205 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 PHLDB2Q86SQ0 1253 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 SPATA2LQ8IUW3 424 aaPredicted RBP18.58■□□□□ 0.56
UPF3A-206ENST00000480362 KLHL23Q8NBE8 558 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 PIK3R5Q8WYR1 880 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 CPXM1Q96SM3 734 aa18.58■□□□□ 0.56
UPF3A-206ENST00000480362 IRX2Q9BZI1 471 aaPredicted RBP18.58■□□□□ 0.56
UPF3A-206ENST00000480362 NCANO14594 1321 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 A0A0A6YYK5 440 aaPredicted RBP18.57■□□□□ 0.56
UPF3A-206ENST00000480362 LINC01553A4QN01 128 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms