RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 FAM126BQ8IXS8 530 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 IFT20Q8IY31 132 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 ANKRD52Q8NB46 1076 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 EXD1Q8NHP7 514 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 SH3TC2Q8TF17 1288 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 SLC35F5Q8WV83 523 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 CPXM1Q96SM3 734 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 LRRC1Q9BTT6 524 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 UNC93B1Q9H1C4 597 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 EPC1Q9H2F5 836 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 ELAC1Q9H777 363 aaKnown RBP11.63□□□□□ -0.55
VTI1A-204ENST00000480057 GOLGA2P5Q9HBQ8 144 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 MIOSQ9NXC5 875 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 DSEQ9UL01 958 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 MTUS1Q9ULD2 1270 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 NME7Q9Y5B8 376 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 FAM187AA6NFU0 413 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 MEIS3P2A8K0S8 358 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 BHMG1C9JSJ3 638 aaPredicted RBP11.62□□□□□ -0.55
VTI1A-204ENST00000480057 CYB561D2O14569 222 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 FSCN2O14926 492 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 CYP11A1P05108 521 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 PFKMP08237 780 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 PYGMP11217 842 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 FGFR1P11362 822 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 CHRNA3P32297 505 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 PTPN7P35236 360 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 MARCKSL1P49006 195 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 SCNN1GP51170 649 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 COPS2P61201 443 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 RPL7AP62424 266 aaKnown RBP11.62□□□□□ -0.55
VTI1A-204ENST00000480057 DHX34Q14147 1143 aaKnown RBP11.62□□□□□ -0.55
VTI1A-204ENST00000480057 MBTPS1Q14703 1052 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 UPP1Q16831 310 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 C2CD6Q53TS8 623 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 GLB1LQ6UWU2 654 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 CCNI2Q6ZMN8 369 aaPredicted RBP11.62□□□□□ -0.55
VTI1A-204ENST00000480057 TTC30AQ86WT1 665 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 C12orf50Q8NA57 414 aaPredicted RBP11.62□□□□□ -0.55
VTI1A-204ENST00000480057 APBB2Q92870 758 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 LPPQ93052 612 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 RBM41Q96IZ5 413 aaKnown RBP11.62□□□□□ -0.55
VTI1A-204ENST00000480057 SENP8Q96LD8 212 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 HSFY1Q96LI6 401 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 MCEEQ96PE7 176 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 KRT12Q99456 494 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 HNRNPABQ99729 332 aaKnown RBP11.62□□□□□ -0.55
VTI1A-204ENST00000480057 OSBPL7Q9BZF2 842 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 TRIM7Q9C029 511 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 GDF3Q9NR23 364 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 HOMER3Q9NSC5 361 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 DDX56Q9NY93 547 aaKnown RBP11.62□□□□□ -0.55
VTI1A-204ENST00000480057 KANSL3Q9P2N6 904 aa11.62□□□□□ -0.55
VTI1A-204ENST00000480057 TMEM189-UBE2V1I3L0A0 370 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 DPYSL4O14531 572 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 SART1O43290 800 aaKnown RBP11.61□□□□□ -0.55
VTI1A-204ENST00000480057 PHF2O75151 1096 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 KRT7P08729 469 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 CCL5P13501 91 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 CAPN2P17655 700 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 DESP17661 470 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 RFC1P35251 1148 aaPredicted RBP11.61□□□□□ -0.55
VTI1A-204ENST00000480057 PLA2G4AP47712 749 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 FNTAP49354 379 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 CLCNKBP51801 687 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 SLC8A3P57103 927 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 ZNF252P-AS1Q0IIN9 211 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 ZNF211Q13398 564 aaPredicted RBP11.61□□□□□ -0.55
VTI1A-204ENST00000480057 HADHQ16836 314 aaKnown RBP11.61□□□□□ -0.55
VTI1A-204ENST00000480057 BEND6Q5SZJ8 279 aaPredicted RBP11.61□□□□□ -0.55
VTI1A-204ENST00000480057 CYP4A22Q5TCH4 519 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 LLGL2Q6P1M3 1020 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 DCLRE1AQ6PJP8 1040 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 DSTYKQ6XUX3 929 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 OSTM1Q86WC4 334 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 RCOR2Q8IZ40 523 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 C12orf29Q8N999 325 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 B3GALNT2Q8NCR0 500 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 UBA3Q8TBC4 463 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 URGCPQ8TCY9 931 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 CRISPLD2Q9H0B8 497 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 ASNSD1Q9NWL6 643 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 TMEM161AQ9NX61 479 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 WBP1LQ9NX94 342 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 CDH9Q9ULB4 789 aa11.61□□□□□ -0.55
VTI1A-204ENST00000480057 TDRD15B5MCY1 1934 aaKnown RBP11.6□□□□□ -0.55
VTI1A-204ENST00000480057 FAM170AA1A519 330 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 E5RJQ4 531 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 M0QZQ0 153 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 XPO1O14980 1071 aaKnown RBP11.6□□□□□ -0.55
VTI1A-204ENST00000480057 RAD51CO43502 376 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 HEXIM1O94992 359 aaKnown RBP11.6□□□□□ -0.55
VTI1A-204ENST00000480057 ODC1P11926 461 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 PTPN1P18031 435 aaKnown RBP11.6□□□□□ -0.55
VTI1A-204ENST00000480057 TYMPP19971 482 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 PSMA2P25787 234 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 PCSK1P29120 753 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 GBP1P32455 592 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 PCK1P35558 622 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 ZNF143P52747 638 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms