RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 TLDC1Q6P9B6 456 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 METTL7BQ6UX53 244 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 TSHZ1Q6ZSZ6 1077 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 ANKLE1Q8NAG6 615 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 ACTL9Q8TC94 416 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 ANKRD36BP1Q96IX9 119 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 TTLL13PA6NNM8 815 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 LRCH4O75427 683 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 KDELR1P24390 212 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 RPA3P35244 121 aaPredicted RBP25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 RFC1P35251 1148 aaPredicted RBP25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 GPX6P59796 221 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 OTUD4Q01804 1114 aaKnown RBP25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 LAMTOR4Q0VGL1 99 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 DNAJC3Q13217 504 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 SCARA3Q6AZY7 606 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 ADGRD1Q6QNK2 874 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 MPZL3Q6UWV2 235 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 FAM47EQ6ZV65 393 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 PYROXD1Q8WU10 500 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 LRMDAQ9H2I8 198 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 CXorf56Q9H5V9 222 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 ACSS3Q9H6R3 686 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 IGKV6-21A0A0C4DH24 114 aa25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 PDE4CQ08493 712 aa25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 FSTL1Q12841 308 aa25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 PTPN20Q4JDL3 420 aa25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 CYP4A22Q5TCH4 519 aa25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 DENND1BQ6P3S1 775 aa25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 CPT1BQ92523 772 aa25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 INPP5DQ92835 1189 aa25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 TMEM237Q96Q45 408 aa25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 LRRC37BQ96QE4 947 aa25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 NOP53Q9NZM5 478 aaKnown RBP25.85■■□□□ 1.73
SYNGAP1-206ENST00000479510 CLUHO75153 1309 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 NFKBIEO00221 500 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 IL18RAPO95256 599 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 GBP2P32456 591 aaPredicted RBP25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 ATP11AP98196 1134 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 TFAMQ00059 246 aaKnown RBP25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 ZNF394Q53GI3 561 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 RIOX2Q8IUF8 465 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 AGGF1Q8N302 714 aaeCLIP25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 AGAP11Q8TF27 550 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 RSAD2Q8WXG1 361 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 HAUS1Q96CS2 278 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 RGS17Q9UGC6 210 aaPredicted RBP25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 PPP2R3BQ9Y5P8 575 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 CST8O60676 142 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 TCF7P36402 384 aaPredicted RBP25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 MYO1EQ12965 1108 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 CBLBQ13191 982 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 LBX2Q6XYB7 198 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 TBC1D31Q96DN5 1066 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 BCO2Q9BYV7 579 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 PTPRHQ9HD43 1115 aa25.84■■□□□ 1.73
SYNGAP1-206ENST00000479510 TM9SF1O15321 606 aa25.83■■□□□ 1.73
SYNGAP1-206ENST00000479510 C4orf33Q8N1A6 199 aa25.83■■□□□ 1.73
SYNGAP1-206ENST00000479510 ACSF2Q96CM8 615 aaPredicted RBP25.83■■□□□ 1.73
SYNGAP1-206ENST00000479510 MYLK2Q9H1R3 596 aa25.83■■□□□ 1.73
SYNGAP1-206ENST00000479510 ACKR2O00590 384 aa25.83■■□□□ 1.72
SYNGAP1-206ENST00000479510 PSMC1P62191 440 aaKnown RBP25.83■■□□□ 1.72
SYNGAP1-206ENST00000479510 SLC1A5Q15758 541 aa25.83■■□□□ 1.72
SYNGAP1-206ENST00000479510 WDR78Q5VTH9 848 aa25.83■■□□□ 1.72
SYNGAP1-206ENST00000479510 KIF2BQ8N4N8 673 aa25.83■■□□□ 1.72
SYNGAP1-206ENST00000479510 ARFGAP1Q8N6T3 406 aa25.83■■□□□ 1.72
SYNGAP1-206ENST00000479510 CMASQ8NFW8 434 aaPredicted RBP25.83■■□□□ 1.72
SYNGAP1-206ENST00000479510 KIF9Q9HAQ2 790 aa25.83■■□□□ 1.72
SYNGAP1-206ENST00000479510 ETNK1Q9HBU6 452 aa25.83■■□□□ 1.72
SYNGAP1-206ENST00000479510 APOC4-APOC2K7ER74 178 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 LGR5O75473 907 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 APOC2P02655 101 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 ATP2A2P16615 1042 aaKnown RBP25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 RPL22P35268 128 aaKnown RBP25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 VSIG1Q86XK7 387 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 PDIK1LQ8N165 341 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 RNF149Q8NC42 400 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 MAK16Q9BXY0 300 aaKnown RBP25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 ZWILCHQ9H900 591 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 CYLDQ9NQC7 956 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 GRID1Q9ULK0 1009 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 CHKBQ9Y259 395 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 C15orf41Q9Y2V0 281 aa25.82■■□□□ 1.72
SYNGAP1-206ENST00000479510 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 GOLGA8SH3BPF8 625 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 RASSF2P50749 326 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 TFDP1Q14186 410 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 HP1BP3Q5SSJ5 553 aaPredicted RBP25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 PLPPR4Q7Z2D5 763 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 C10orf82Q8WW14 230 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 RSRC1Q96IZ7 334 aaKnown RBP25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 FZD8Q9H461 694 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 LTBP3Q9NS15 1303 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 FZD9O00144 591 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 HNRNPCL1O60812 293 aaKnown RBP25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 SRGAP2CP0DJJ0 459 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 CD19P15391 556 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 KRT4P19013 534 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 IL1R2P27930 398 aa25.81■■□□□ 1.72
SYNGAP1-206ENST00000479510 GABRB2P47870 512 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms