RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 TUFMP49411 452 aaKnown RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 MCCD1P59942 119 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 MYL5Q02045 173 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 SMARCB1Q12824 385 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 VEPH1Q14D04 833 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 MAPRE1Q15691 268 aaKnown RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 DDR2Q16832 855 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 SLC5A9Q2M3M2 681 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 CT47A1Q5JQC4 288 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 CYP26C1Q6V0L0 522 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 PDZD4Q76G19 769 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 RTL10Q7L3V2 364 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 HS6ST3Q8IZP7 471 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 GJD3Q8N144 294 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 PPM1KQ8N3J5 372 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 AOPEPQ8N6M6 819 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 ST13P5Q8NFI4 369 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 ITFG1Q8TB96 612 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 MYCBPAPQ8TBZ2 947 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 PCED1BQ96HM7 432 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 TNIP3Q96KP6 325 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 ZNF512Q96ME7 567 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 NT5C1BQ96P26 610 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 INTS2Q9H0H0 1204 aaKnown RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 ASAH2Q9NR71 780 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 CISHQ9NSE2 258 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 COQ4Q9Y3A0 265 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 ANAPC1Q9H1A4 1944 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 CCDC130P13994 396 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 CEBPBP17676 345 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 PTPN2P17706 415 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 TRIM21P19474 475 aaKnown RBP7.34□□□□□ -1.23
BRCA1-215ENST00000478531 ANXA13P27216 316 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 GRIK1P39086 918 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 INCA1Q0VD86 236 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 CUL2Q13617 745 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 MAN2A1Q16706 1144 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 CFAP221Q4G0U5 840 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 TCP11X2Q5H9J9 407 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 FAM171BQ6P995 826 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 RRAGAQ7L523 313 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 OTOP3Q7RTS5 596 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 C12orf29Q8N999 325 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 ENOX1Q8TC92 643 aaKnown RBP7.34□□□□□ -1.23
BRCA1-215ENST00000478531 ACSF2Q96CM8 615 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-215ENST00000478531 TCEAL4Q96EI5 215 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 FUBP3Q96I24 572 aaKnown RBP eCLIP7.34□□□□□ -1.23
BRCA1-215ENST00000478531 TWNKQ96RR1 684 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 MYADMQ96S97 322 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 TUBGCP2Q9BSJ2 902 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 ZNF518BQ9C0D4 1074 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 NAT10Q9H0A0 1025 aaKnown RBP7.34□□□□□ -1.23
BRCA1-215ENST00000478531 SLITRK6Q9H5Y7 841 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 CYP3A43Q9HB55 503 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 ABCB6Q9NP58 842 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 CD320Q9NPF0 282 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 FANCLQ9NW38 375 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 TAB2Q9NYJ8 693 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 MAGED2Q9UNF1 606 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-215ENST00000478531 MRPS23Q9Y3D9 190 aaKnown RBP7.34□□□□□ -1.23
BRCA1-215ENST00000478531 ATP8B3O60423 1300 aa7.34□□□□□ -1.23
BRCA1-215ENST00000478531 NUP210Q8TEM1 1887 aaPredicted RBP7.34□□□□□ -1.24
BRCA1-215ENST00000478531 LOC730098B7Z3J9 87 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 P4HA2O15460 535 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 CILPO75339 1184 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 LETM1O95202 739 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 PAPLNO95428 1278 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 POU2F2P09086 479 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 GJA1P17302 382 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 EEF1GP26641 437 aaKnown RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 ADORA2BP29275 332 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 CCR2P41597 374 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 APBA1Q02410 837 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 IFRD2Q12894 506 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 MTMR3Q13615 1198 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 NFKBIBQ15653 356 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 SKOR2Q2VWA4 1001 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 ZSCAN23Q3MJ62 389 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 CYP4A22Q5TCH4 519 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 ITIH5Q86UX2 942 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 FAM35AQ86V20 835 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 UNC93AQ86WB7 457 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 ARHGEF19Q8IW93 802 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 SLC2A14Q8TDB8 520 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 KAT5Q92993 513 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 PSMG2Q969U7 264 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 JAKMIP2Q96AA8 810 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 NT5C1AQ9BXI3 368 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 B3GNT5Q9BYG0 378 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 ELOVL4Q9GZR5 314 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 ZNF334Q9HCZ1 680 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 KRT82Q9NSB4 513 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 HSFX1Q9UBD0 423 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 HELZP42694 1942 aaKnown RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 A0A1W2PRU2 124 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 C19orf67A6NJJ6 358 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 F8VP50 259 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 NRG2O14511 850 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 PMM2O15305 246 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 AP1G2O75843 785 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms