RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 DENND4CQ5VZ89 1909 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 ZNF638Q14966 1978 aaKnown RBP12.52□□□□□ -0.41
VARS2-208ENST00000477052 SPTBN2O15020 2390 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 C2orf78A6NCI8 922 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 ANTXRLA6NF34 631 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 CLIC2O15247 247 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 SPTLC2O15270 562 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
VARS2-208ENST00000477052 EGFP01133 1207 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 CYP2J2P51589 502 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 MLLT6P55198 1093 aaPredicted RBP12.51□□□□□ -0.41
VARS2-208ENST00000477052 ASIC1P78348 528 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 PLCB2Q00722 1185 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 MYL7Q01449 175 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 SMARCB1Q12824 385 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 RUNX3Q13761 415 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 PPP2R5DQ14738 602 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 E2F4Q16254 413 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 NFE2Q16621 373 aaPredicted RBP12.51□□□□□ -0.41
VARS2-208ENST00000477052 DGKKQ5KSL6 1271 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 SHC4Q6S5L8 630 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 MON1AQ86VX9 555 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 SPATA2LQ8IUW3 424 aaPredicted RBP12.51□□□□□ -0.41
VARS2-208ENST00000477052 NELFCDQ8IXH7 590 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 LRRC52Q8N7C0 313 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 ARL14EPQ8N8R7 260 aaPredicted RBP12.51□□□□□ -0.41
VARS2-208ENST00000477052 KBTBD7Q8WVZ9 684 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 MRPS31Q92665 395 aaKnown RBP12.51□□□□□ -0.41
VARS2-208ENST00000477052 HPDLQ96IR7 371 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 BLZF1Q9H2G9 400 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 CRTAC1Q9NQ79 661 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 INTS13Q9NVM9 706 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 GDAP2Q9NXN4 497 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 NME7Q9Y5B8 376 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 WNT6Q9Y6F9 365 aa12.51□□□□□ -0.41
VARS2-208ENST00000477052 SDK1Q7Z5N4 2213 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 ZNF233A6NK53 670 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 K7ELQ4 463 aaPredicted RBP12.5□□□□□ -0.41
VARS2-208ENST00000477052 GABRDO14764 452 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 SCAMP3O14828 347 aaKnown RBP12.5□□□□□ -0.41
VARS2-208ENST00000477052 GDF9O60383 454 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 NOL4O94818 638 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 CST3P01034 146 aaPredicted RBP12.5□□□□□ -0.41
VARS2-208ENST00000477052 TNNC2P02585 160 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 CSH1P0DML2 217 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 CSH2P0DML3 217 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 DLATP10515 647 aaKnown RBP12.5□□□□□ -0.41
VARS2-208ENST00000477052 BDNFP23560 247 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 WEE1P30291 646 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 GALK1P51570 392 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 USP46P62068 366 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 LAIR1Q6GTX8 287 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 CEP68Q76N32 757 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 LONP2Q86WA8 852 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 TMEM86AQ8N2M4 240 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 MYLPFQ96A32 169 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 CCDC127Q96BQ5 260 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 MSANTD3Q96H12 275 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 INTS4Q96HW7 963 aaKnown RBP12.5□□□□□ -0.41
VARS2-208ENST00000477052 ANKRD36BP1Q96IX9 119 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 SYT15Q9BQS2 421 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 MRPL45Q9BRJ2 306 aaKnown RBP12.5□□□□□ -0.41
VARS2-208ENST00000477052 IER2Q9BTL4 223 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 BACH2Q9BYV9 841 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 TRIM9Q9C026 710 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 LINC00597Q9H2U6 94 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 ZSCAN16Q9H4T2 348 aaPredicted RBP12.5□□□□□ -0.41
VARS2-208ENST00000477052 TMEM206Q9H813 350 aa12.5□□□□□ -0.41
VARS2-208ENST00000477052 CDV3Q9UKY7 258 aaKnown RBP12.5□□□□□ -0.41
VARS2-208ENST00000477052 AXIN1O15169 862 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 TGFB1I1O43294 461 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 RNF40O75150 1001 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 CKMP06732 381 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 RPL10AP62906 217 aaKnown RBP12.49□□□□□ -0.41
VARS2-208ENST00000477052 CYP27A1Q02318 531 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 ALCAMQ13740 583 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 DUOXA2Q1HG44 320 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 TMEM196Q5HYL7 178 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 CC2D1AQ6P1N0 951 aaPredicted RBP12.49□□□□□ -0.41
VARS2-208ENST00000477052 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.49□□□□□ -0.41
VARS2-208ENST00000477052 GRAMD1CQ8IYS0 662 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 FAM160A2Q8N612 972 aaPredicted RBP12.49□□□□□ -0.41
VARS2-208ENST00000477052 TOP6BLQ8N6T0 577 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 SPRYD3Q8NCJ5 442 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 LEO1Q8WVC0 666 aaPredicted RBP12.49□□□□□ -0.41
VARS2-208ENST00000477052 EZH1Q92800 747 aaPredicted RBP12.49□□□□□ -0.41
VARS2-208ENST00000477052 MMS19Q96T76 1030 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 TNMDQ9H2S6 317 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 AGPAT3Q9NRZ7 376 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 KBTBD4Q9NVX7 518 aa12.49□□□□□ -0.41
VARS2-208ENST00000477052 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.48□□□□□ -0.41
VARS2-208ENST00000477052 RETP07949 1114 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 PCSK1P29120 753 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 GJA4P35212 333 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 GRIK1P39086 918 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 AFMP43652 599 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 LHX1P48742 406 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 CASP4P49662 377 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 CACNA2D1P54289 1103 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms