RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 ATICP31939 592 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 CDR1P51861 262 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 STARD6P59095 220 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 RPL10AP62906 217 aaKnown RBP12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 MAPRE1Q15691 268 aaKnown RBP12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 CFAP221Q4G0U5 840 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 SCARA3Q6AZY7 606 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 POTEHQ6S545 545 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 SUMF1Q8NBK3 374 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 KBTBD7Q8WVZ9 684 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 IRF7Q92985 503 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 SYAP1Q96A49 352 aaPredicted RBP12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 SYT15Q9BQS2 421 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 TRMT61BQ9BVS5 477 aaKnown RBP12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 PLA2G2FQ9BZM2 168 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 BRD9Q9H8M2 597 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 TRPV4Q9HBA0 871 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 ZNF334Q9HCZ1 680 aaPredicted RBP12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 TMLHEQ9NVH6 421 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 GTF3C4Q9UKN8 822 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 CDH9Q9ULB4 789 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 TRAF3IP3Q9Y228 551 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 FRMD4BQ9Y2L6 1034 aa12.19□□□□□ -0.46
NUDCD3-206ENST00000475952 FAM208BQ5VWN6 2430 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 LRRIQ3A6PVS8 624 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 TACC1O75410 805 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 CST3P01034 146 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 DCNP07585 359 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 CSH1P0DML2 217 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 CSH2P0DML3 217 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 NR2F2P24468 414 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 CASP4P49662 377 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 PSMC1P62191 440 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 CLDN10P78369 228 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 GRM2Q14416 872 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 ZNF699Q32M78 642 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 WDR72Q3MJ13 1102 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 SLC44A4Q53GD3 710 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 GPR158Q5T848 1215 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 CEP135Q66GS9 1140 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 VITQ6UXI7 678 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 GAREM2Q75VX8 874 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 LIMS2Q7Z4I7 341 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 YAF2Q8IY57 180 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 GUF1Q8N442 669 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 PJA1Q8NG27 643 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 PARD3BQ8TEW8 1205 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 ZSWIM3Q96MP5 696 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 PKMYT1Q99640 499 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 GZF1Q9H116 711 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 SNX25Q9H3E2 840 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 DMAC2Q9NW81 257 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 RMND1Q9NWS8 449 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 UXTQ9UBK9 157 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 HOOK1Q9UJC3 728 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 SIT1Q9Y3P8 196 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 MYOFQ9NZM1 2061 aa12.18□□□□□ -0.46
NUDCD3-206ENST00000475952 KANSL1LA0AUZ9 987 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 MYBPHLA2RUH7 354 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 HEPACAM2A8MVW5 462 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 DPYSL4O14531 572 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 MAPK13O15264 365 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 HCRTO43612 131 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 FAM163BP0C2L3 166 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 CYP2F1P24903 491 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 DDX6P26196 483 aaKnown RBP eCLIP12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 RPL13P26373 211 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 GDI1P31150 447 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 VIPR2P41587 438 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 MYL6P60660 151 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 CYP4F8P98187 520 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 FAM160A1Q05DH4 1040 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 NFIL3Q16649 462 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 ZNF667Q5HYK9 610 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 STXBP5Q5T5C0 1151 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 TDRD10Q5VZ19 366 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 FAM171BQ6P995 826 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 VSTM1Q6UX27 236 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 TPRG1Q6ZUI0 275 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 INTS8Q75QN2 995 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 C1orf210Q8IVY1 113 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 MFSD6LQ8IWD5 586 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 FMR1NBQ8N0W7 255 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 OR6B3Q8NGW1 331 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 PLEKHO2Q8TD55 490 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 ZNF516Q92618 1163 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 MYLPFQ96A32 169 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 MRPL45Q9BRJ2 306 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 DDX23Q9BUQ8 820 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 FOXQ1Q9C009 403 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 TASP1Q9H6P5 420 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 VRTNQ9H8Y1 702 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 HEBP1Q9NRV9 189 aa12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 MAGEC2Q9UBF1 373 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 NXF1Q9UBU9 619 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 MAGED2Q9UNF1 606 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-206ENST00000475952 SPEGQ15772 3267 aa12.16□□□□□ -0.46
NUDCD3-206ENST00000475952 WDFY3Q8IZQ1 3526 aa12.16□□□□□ -0.46
NUDCD3-206ENST00000475952 ZNF263O14978 683 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms