RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 XYLT2Q9H1B5 865 aa21.29■■□□□ 1
TMEM54-204ENST00000474144 TRPV5Q9NQA5 729 aa21.29■■□□□ 1
TMEM54-204ENST00000474144 NDRG2Q9UN36 371 aaKnown RBP21.29■■□□□ 1
TMEM54-204ENST00000474144 PIAS3Q9Y6X2 628 aa21.29■■□□□ 1
TMEM54-204ENST00000474144 PATJQ8NI35 1801 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 SLC38A8A6NNN8 435 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 DPYSL4O14531 572 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 CHADO15335 359 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 NR3C1P04150 777 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 CSH1P0DML2 217 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 CSH2P0DML3 217 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 TRPC3Q13507 836 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 WDR72Q3MJ13 1102 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 TDRD10Q5VZ19 366 aaKnown RBP21.28■■□□□ 1
TMEM54-204ENST00000474144 TXNDC8Q6A555 127 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 SLC9A9Q8IVB4 645 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 SCN4BQ8IWT1 228 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 ZNF687Q8N1G0 1237 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 MAB21L3Q8N8X9 362 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 TTC8Q8TAM2 541 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 PARD3BQ8TEW8 1205 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 SPATA6Q9NWH7 488 aaPredicted RBP21.28■■□□□ 1
TMEM54-204ENST00000474144 MAPK8IP1Q9UQF2 711 aa21.28■■□□□ 1
TMEM54-204ENST00000474144 PDXKO00764 312 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 PHACTR2O75167 634 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 TADA3O75528 432 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 NOL4O94818 638 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 RHOBTB3O94955 611 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 ZNF202O95125 648 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 SP9P0CG40 484 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 BDNFP23560 247 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 WEE1P30291 646 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 GNL1P36915 607 aaPredicted RBP21.27■■□□□ 1
TMEM54-204ENST00000474144 SOX9P48436 509 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 RPL10AP62906 217 aaKnown RBP21.27■■□□□ 1
TMEM54-204ENST00000474144 TNNC1P63316 161 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 OR6B3Q8NGW1 331 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 FAM3CQ92520 227 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 CLDN23Q96B33 292 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 FUBP3Q96I24 572 aaKnown RBP eCLIP21.27■■□□□ 1
TMEM54-204ENST00000474144 NELL2Q99435 816 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 SNX25Q9H3E2 840 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 DPEP3Q9H4B8 488 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 MAGEC2Q9UBF1 373 aaPredicted RBP21.27■■□□□ 1
TMEM54-204ENST00000474144 NXF1Q9UBU9 619 aaKnown RBP21.27■■□□□ 1
TMEM54-204ENST00000474144 CCL26Q9Y258 94 aa21.27■■□□□ 1
TMEM54-204ENST00000474144 PIEZO1Q92508 2521 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 PTPRDP23468 1912 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 PRR23AA6NEV1 266 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 MAN2B1O00754 1011 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 TACC1O75410 805 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 C4BPAP04003 597 aaKnown RBP21.26■□□□□ 0.99
TMEM54-204ENST00000474144 CCNE1P24864 410 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 CLDN10P78369 228 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 CYP27A1Q02318 531 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 BIRC3Q13489 604 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 BECN1Q14457 450 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 MDH1BQ5I0G3 518 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 CEP135Q66GS9 1140 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 C4orf50Q6ZRC1 276 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 CMTM8Q8IZV2 173 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 BPIFB1Q8TDL5 484 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 CSGALNACT1Q8TDX6 532 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 TMEM174Q8WUU8 243 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 PCED1BQ96HM7 432 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 OBP2AQ9NY56 170 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 GTSE1Q9NYZ3 720 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 MRPS17Q9Y2R5 130 aaKnown RBP21.26■□□□□ 0.99
TMEM54-204ENST00000474144 R4GN57 208 aa21.26■□□□□ 0.99
TMEM54-204ENST00000474144 GREB1Q4ZG55 1949 aa21.25■□□□□ 0.99
TMEM54-204ENST00000474144 VNN1O95497 513 aa21.25■□□□□ 0.99
TMEM54-204ENST00000474144 STAU1O95793 577 aaKnown RBP21.25■□□□□ 0.99
TMEM54-204ENST00000474144 ATICP31939 592 aa21.25■□□□□ 0.99
TMEM54-204ENST00000474144 MAGEA11P43364 429 aa21.25■□□□□ 0.99
TMEM54-204ENST00000474144 CDH8P55286 799 aa21.25■□□□□ 0.99
TMEM54-204ENST00000474144 RIN3Q8TB24 985 aa21.25■□□□□ 0.99
TMEM54-204ENST00000474144 NKD2Q969F2 451 aaPredicted RBP21.25■□□□□ 0.99
TMEM54-204ENST00000474144 SYAP1Q96A49 352 aaPredicted RBP21.25■□□□□ 0.99
TMEM54-204ENST00000474144 MYRFLQ96LU7 910 aa21.25■□□□□ 0.99
TMEM54-204ENST00000474144 SMYD3Q9H7B4 428 aa21.25■□□□□ 0.99
TMEM54-204ENST00000474144 TRAF3IP3Q9Y228 551 aa21.25■□□□□ 0.99
TMEM54-204ENST00000474144 CACNA1IQ9P0X4 2223 aa21.25■□□□□ 0.99
TMEM54-204ENST00000474144 KIF26AQ9ULI4 1882 aaPredicted RBP21.24■□□□□ 0.99
TMEM54-204ENST00000474144 NCAM2O15394 837 aa21.24■□□□□ 0.99
TMEM54-204ENST00000474144 GRIK1P39086 918 aa21.24■□□□□ 0.99
TMEM54-204ENST00000474144 RAP1GAPP47736 663 aa21.24■□□□□ 0.99
TMEM54-204ENST00000474144 KPNA1P52294 538 aaPredicted RBP21.24■□□□□ 0.99
TMEM54-204ENST00000474144 TNK2Q07912 1038 aa21.24■□□□□ 0.99
TMEM54-204ENST00000474144 ARHGAP29Q52LW3 1261 aa21.24■□□□□ 0.99
TMEM54-204ENST00000474144 C1orf220Q5T0J3 134 aa21.24■□□□□ 0.99
TMEM54-204ENST00000474144 CELF5Q8N6W0 485 aaKnown RBP21.24■□□□□ 0.99
TMEM54-204ENST00000474144 MYCBPAPQ8TBZ2 947 aa21.24■□□□□ 0.99
TMEM54-204ENST00000474144 MRPS31Q92665 395 aaKnown RBP21.24■□□□□ 0.99
TMEM54-204ENST00000474144 USP13Q92995 863 aaPredicted RBP21.24■□□□□ 0.99
TMEM54-204ENST00000474144 CCDC47Q96A33 483 aaKnown RBP21.24■□□□□ 0.99
TMEM54-204ENST00000474144 TRMT2BQ96GJ1 504 aaKnown RBP21.24■□□□□ 0.99
TMEM54-204ENST00000474144 ZNF638Q14966 1978 aaKnown RBP21.24■□□□□ 0.99
TMEM54-204ENST00000474144 A8MXQ7 604 aa21.23■□□□□ 0.99
TMEM54-204ENST00000474144 LAMTOR5O43504 91 aa21.23■□□□□ 0.99
TMEM54-204ENST00000474144 CALUO43852 315 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms