RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 HCRTO43612 131 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 ATP2C2O75185 946 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 PSMC3P17980 439 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 BDNFP23560 247 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 AVPR1AP37288 418 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 GPR15P49685 360 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 EPHA5P54756 1037 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 FOXK2Q01167 660 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 IFRD2Q12894 506 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-222ENST00000473373 MLF2Q15773 248 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-222ENST00000473373 ZNF658Q5TYW1 1059 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-222ENST00000473373 TDRD10Q5VZ19 366 aaKnown RBP12.31□□□□□ -0.44
CPNE1-222ENST00000473373 SCARA3Q6AZY7 606 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 ISM2Q6H9L7 571 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 TPRG1Q6ZUI0 275 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 INTS8Q75QN2 995 aaKnown RBP12.31□□□□□ -0.44
CPNE1-222ENST00000473373 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 DEPDC1BQ8WUY9 529 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 ZNF516Q92618 1163 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 ERCC4Q92889 916 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-222ENST00000473373 IRF7Q92985 503 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 MYLPFQ96A32 169 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 GSDMAQ96QA5 445 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 MRPL45Q9BRJ2 306 aaKnown RBP12.31□□□□□ -0.44
CPNE1-222ENST00000473373 GTPBP4Q9BZE4 634 aaKnown RBP12.31□□□□□ -0.44
CPNE1-222ENST00000473373 ABCB6Q9NP58 842 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 TRAF3IP3Q9Y228 551 aa12.31□□□□□ -0.44
CPNE1-222ENST00000473373 MYBPHLA2RUH7 354 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 KRBA1A5PL33 1030 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 HEPACAM2A8MVW5 462 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 TRIM66O15016 1216 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 ABL1P00519 1130 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 TRIM49P0CI25 452 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 TRIM49CP0CI26 452 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 AOC1P19801 751 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 LMO2P25791 158 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 VIPR2P41587 438 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 RAP1GAPP47736 663 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 KPNA1P52294 538 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-222ENST00000473373 DLG4P78352 724 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 SGSM1Q2NKQ1 1148 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 SLC44A4Q53GD3 710 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 DCAF17Q5H9S7 520 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-222ENST00000473373 STXBP5Q5T5C0 1151 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 CWF19L1Q69YN2 538 aaKnown RBP12.3□□□□□ -0.44
CPNE1-222ENST00000473373 TMC8Q8IU68 726 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 ARID3BQ8IVW6 561 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-222ENST00000473373 ADSSL1Q8N142 457 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 MAB21L3Q8N8X9 362 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 CXorf38Q8TB03 319 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 KBTBD7Q8WVZ9 684 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 NKD2Q969F2 451 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-222ENST00000473373 FUBP3Q96I24 572 aaKnown RBP eCLIP12.3□□□□□ -0.44
CPNE1-222ENST00000473373 TNIP3Q96KP6 325 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 ZSWIM3Q96MP5 696 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 TIGD1Q96MW7 591 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 PLA2G2FQ9BZM2 168 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 DMAC2Q9NW81 257 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 THG1LQ9NWX6 298 aaKnown RBP12.3□□□□□ -0.44
CPNE1-222ENST00000473373 CHMP5Q9NZZ3 219 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 MRPS17Q9Y2R5 130 aaKnown RBP12.3□□□□□ -0.44
CPNE1-222ENST00000473373 SIT1Q9Y3P8 196 aa12.3□□□□□ -0.44
CPNE1-222ENST00000473373 SLC38A8A6NNN8 435 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 GABRDO14764 452 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 PSMA7O14818 248 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 NCAM2O15394 837 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 PI15O43692 258 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 STX10O60499 249 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 TACC1O75410 805 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 HLA-DRAP01903 254 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 DCNP07585 359 aaKnown RBP12.29□□□□□ -0.44
CPNE1-222ENST00000473373 PRCPP42785 496 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 GCLMP48507 274 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 PRKCQQ04759 706 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 CCDC142Q17RM4 750 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 KLHL10Q6JEL2 608 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 CC2D1AQ6P1N0 951 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-222ENST00000473373 VITQ6UXI7 678 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 GAREM2Q75VX8 874 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 PLEKHO2Q8TD55 490 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 DNASE1L2Q92874 299 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 ELMO3Q96BJ8 720 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 EEF2KMTQ96G04 330 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 PCED1BQ96HM7 432 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 FOXQ1Q9C009 403 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 TASP1Q9H6P5 420 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 SMYD3Q9H7B4 428 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 HEBP1Q9NRV9 189 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 EHD2Q9NZN4 543 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 ZMYM5Q9UJ78 669 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 NDRG2Q9UN36 371 aaKnown RBP12.29□□□□□ -0.44
CPNE1-222ENST00000473373 PCDHA5Q9Y5H7 936 aa12.29□□□□□ -0.44
CPNE1-222ENST00000473373 ATG2BQ96BY7 2078 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 KANSL1LA0AUZ9 987 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 IKBKBO14920 756 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 MAPK13O15264 365 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 MOSPD3O75425 235 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 AKAP3O75969 853 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 STAU1O95793 577 aaKnown RBP12.28□□□□□ -0.44
CPNE1-222ENST00000473373 C4BPAP04003 597 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms