RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 VNN1O95497 513 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 RPL13P26373 211 aaKnown RBP24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 GDI1P31150 447 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 MAGEA11P43364 429 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 ZACNQ401N2 412 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 ZCWPW2Q504Y3 356 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 SMYD4Q8IYR2 804 aaPredicted RBP24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 DTWD2Q8NBA8 298 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 STKLD1Q8NE28 680 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 IRF7Q92985 503 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 FOXQ1Q9C009 403 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 ZMYM5Q9UJ78 669 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 MAGED2Q9UNF1 606 aaPredicted RBP24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 NME7Q9Y5B8 376 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 TICRRQ7Z2Z1 1910 aa24.09■■□□□ 1.45
PTP4A1-203ENST00000473334 H0Y858 1186 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 IKBKBO14920 756 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 AKAP3O75969 853 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 NOL4O94818 638 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 F11P03951 625 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 WEE1P30291 646 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 HOXD11P31277 338 aaPredicted RBP24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 VAMP7P51809 220 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 NLRP12P59046 1061 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 ZNF667Q5HYK9 610 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 VSTM1Q6UX27 236 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 TPRG1Q6ZUI0 275 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 INTS8Q75QN2 995 aaKnown RBP24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 SCN4BQ8IWT1 228 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 MYCBPAPQ8TBZ2 947 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 RSPRY1Q96DX4 576 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 TIGD1Q96MW7 591 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 GSDMAQ96QA5 445 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 TRPV5Q9NQA5 729 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 HEBP1Q9NRV9 189 aa24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 UXTQ9UBK9 157 aaPredicted RBP24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 HOOK1Q9UJC3 728 aaKnown RBP24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 CIZ1Q9ULV3 898 aaPredicted RBP24.08■■□□□ 1.45
PTP4A1-203ENST00000473334 SLC38A8A6NNN8 435 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 DPYSL4O14531 572 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 ZNF263O14978 683 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 SMC2O95347 1197 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 DCNP07585 359 aaKnown RBP24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 CYP27A1Q02318 531 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 EDRF1Q3B7T1 1238 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 MDH1BQ5I0G3 518 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 C1orf220Q5T0J3 134 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 SV2AQ7L0J3 742 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 TMEM150AQ86TG1 271 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 YAF2Q8IY57 180 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 FAM186BQ8IYM0 893 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 TRMT2BQ96GJ1 504 aaKnown RBP24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 PCED1BQ96HM7 432 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 SMYD3Q9H7B4 428 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 OBP2AQ9NY56 170 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 GREB1Q4ZG55 1949 aa24.07■■□□□ 1.44
PTP4A1-203ENST00000473334 A8MXQ7 604 aa24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 KRT13P13646 458 aa24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 BDNFP23560 247 aa24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 DDX6P26196 483 aaKnown RBP eCLIP24.06■■□□□ 1.445e-6■■■□□ 15
PTP4A1-203ENST00000473334 PSMC2P35998 433 aaKnown RBP24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 ENPEPQ07075 957 aa24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 FCHO2Q0JRZ9 810 aa24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 ADAM9Q13443 819 aa24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 ZNF658Q5TYW1 1059 aaPredicted RBP24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 GPIHBP1Q8IV16 184 aa24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 ATOH1Q92858 354 aaPredicted RBP24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 MYRFLQ96LU7 910 aa24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 LTB4R2Q9NPC1 389 aa24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 DLGAP2Q9P1A6 1054 aa24.06■■□□□ 1.44
PTP4A1-203ENST00000473334 PRAMEF12O95522 483 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 P4HA1P13674 534 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 PTPN1P18031 435 aaKnown RBP24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 UBXN2BQ14CS0 331 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 SGSM1Q2NKQ1 1148 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 COBLL1Q53SF7 1204 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 SCARA5Q6ZMJ2 495 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 SPATA20Q8TB22 786 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 MRPS31Q92665 395 aaKnown RBP24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 TAF4BQ92750 862 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 SMARCE1Q969G3 411 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 SPATA17Q96L03 361 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 CEP295NLQ96MC4 621 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 SLC46A2Q9BY10 475 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 OSBPL6Q9BZF3 934 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 DPEP3Q9H4B8 488 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 FAM86C1Q9NVL1 165 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 PCDHA5Q9Y5H7 936 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 ZNF638Q14966 1978 aaKnown RBP24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 CACNA1HO95180 2353 aa24.05■■□□□ 1.44
PTP4A1-203ENST00000473334 SOBPA7XYQ1 873 aa24.04■■□□□ 1.44
PTP4A1-203ENST00000473334 CHADO15335 359 aa24.04■■□□□ 1.44
PTP4A1-203ENST00000473334 TADA3O75528 432 aa24.04■■□□□ 1.44
PTP4A1-203ENST00000473334 TRIM49P0CI25 452 aa24.04■■□□□ 1.44
PTP4A1-203ENST00000473334 TRIM49CP0CI26 452 aa24.04■■□□□ 1.44
PTP4A1-203ENST00000473334 CD72P21854 359 aa24.04■■□□□ 1.44
PTP4A1-203ENST00000473334 GRIK1P39086 918 aa24.04■■□□□ 1.44
PTP4A1-203ENST00000473334 PIK3CAP42336 1068 aa24.04■■□□□ 1.44
PTP4A1-203ENST00000473334 PRCPP42785 496 aa24.04■■□□□ 1.44
PTP4A1-203ENST00000473334 RAP1GAPP47736 663 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms