RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	MRPL17	Q9NRX2	175 aa	Known RBP	11.17	□□□□□ -0.62
PUM1-208	ENST00000471894	TSPAN16	Q9UKR8	245 aa		11.17	□□□□□ -0.62
PUM1-208	ENST00000471894	MTUS1	Q9ULD2	1270 aa		11.17	□□□□□ -0.62
PUM1-208	ENST00000471894	ZKSCAN5	Q9Y2L8	839 aa		11.17	□□□□□ -0.62
PUM1-208	ENST00000471894	YBX2	Q9Y2T7	364 aa	Known RBP	11.17	□□□□□ -0.62
PUM1-208	ENST00000471894	PCDHA13	Q9Y5I0	950 aa		11.17	□□□□□ -0.62
PUM1-208	ENST00000471894	ADGRG1	Q9Y653	693 aa		11.17	□□□□□ -0.62
PUM1-208	ENST00000471894	MYH10	P35580	1976 aa		11.17	□□□□□ -0.62
PUM1-208	ENST00000471894	GBF1	Q92538	1859 aa		11.17	□□□□□ -0.62
PUM1-208	ENST00000471894	CLDN5	O00501	218 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	ZNF263	O14978	683 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	TBC1D4	O60343	1298 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	ARHGEF15	O94989	841 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	CXCL14	O95715	111 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	LSM8	O95777	96 aa	Known RBP	11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	FTL	P02792	175 aa	Predicted RBP	11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	CYP1A1	P04798	512 aa	Predicted RBP	11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	CCDC175	P0C221	793 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	OR4Q2	P0C623	313 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	UNG	P13051	313 aa	Predicted RBP	11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	DNAJB2	P25686	324 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	CA8	P35219	290 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	SLC8A3	P57103	927 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	MLLT1	Q03111	559 aa	Predicted RBP	11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	TAP1	Q03518	808 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	NFE2	Q16621	373 aa	Predicted RBP	11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	CCDC142	Q17RM4	750 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	SLC39A12	Q504Y0	691 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	C4orf50	Q6ZRC1	276 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	TMC7	Q7Z402	723 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	FUK	Q8N0W3	1084 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	ANKRD52	Q8NB46	1076 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	FBXO22	Q8NEZ5	403 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	OLIG1	Q8TAK6	271 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	PCED1B	Q96HM7	432 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	PBX4	Q9BYU1	374 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	NKX2-4	Q9H2Z4	354 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	ALG13	Q9NP73	1137 aa	Known RBP	11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	TMLHE	Q9NVH6	421 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	TAS2R14	Q9NYV8	317 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	MTRR	Q9UBK8	725 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	SSX2IP	Q9Y2D8	614 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	PPP2R2C	Q9Y2T4	447 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	BACE2	Q9Y5Z0	518 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	NLRC5	Q86WI3	1866 aa		11.16	□□□□□ -0.62
PUM1-208	ENST00000471894	ATP8B3	O60423	1300 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	C5orf67	F2Z3F1	127 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	ZSCAN12	O43309	604 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	H2AFZ	P0C0S5	128 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	FAM200B	P0CF97	657 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	CTSA	P10619	480 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	CPB1	P15086	417 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	RPL17	P18621	184 aa	Known RBP	11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	BDNF	P23560	247 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	CDH5	P33151	784 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	OR1D2	P34982	312 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	GPD2	P43304	727 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	NSF	P46459	744 aa	Known RBP	11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	BCAT1	P54687	386 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	ERVK-21	P61565	698 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	NOMO3	P69849	1222 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	BST2	Q10589	180 aa	Known RBP	11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	PPP1R2P3	Q6NXS1	205 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	CHRDL2	Q6WN34	429 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	PAQR9	Q6ZVX9	377 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	H2AFV	Q71UI9	128 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	TTC30A	Q86WT1	665 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	ERICH1	Q86X53	443 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	DNAAF5	Q86Y56	855 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	GPR65	Q8IYL9	337 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	TXLNB	Q8N3L3	684 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	WDTC1	Q8N5D0	677 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	C1orf131	Q8NDD1	294 aa	Known RBP	11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	SPPL3	Q8TCT6	385 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	MICAL1	Q8TDZ2	1067 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	AUTS2	Q8WXX7	1259 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	SECISBP2L	Q93073	1101 aa	Known RBP	11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	MYLPF	Q96A32	169 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	NOX5	Q96PH1	765 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	PKMYT1	Q99640	499 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	DUSP16	Q9BY84	665 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	ZBP1	Q9H171	429 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	ISCU	Q9H1K1	167 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	TRMT1	Q9NXH9	659 aa	Known RBP	11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	NENF	Q9UMX5	172 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	LZTS1	Q9Y250	596 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	REXO2	Q9Y3B8	237 aa	Known RBP	11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	CDY1	Q9Y6F8	540 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	PDE4DIP	Q5VU43	2346 aa		11.15	□□□□□ -0.62
PUM1-208	ENST00000471894	ANKRD62	A6NC57	917 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	CCP110	O43303	1012 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	LPXN	O60711	386 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	AP1G2	O75843	785 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	SETSIP	P0DME0	302 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	ABCB4	P21439	1286 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	VAV2	P52735	878 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	GALC	P54803	685 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms