RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 ACAP3Q96P50 834 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 SERPINB12Q96P63 405 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 TWNKQ96RR1 684 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 CPXM1Q96SM3 734 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 FRMD8P1Q9BZ68 369 aaPredicted RBP19.61■□□□□ 0.73
COL20A1-205ENST00000471582 PPANQ9NQ55 473 aaKnown RBP19.61■□□□□ 0.73
COL20A1-205ENST00000471582 TMEM88BA6NKF7 163 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 SMPD1P17405 629 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 GRM5P41594 1212 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 DGKDQ16760 1214 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 HADHQ16836 314 aaKnown RBP19.61■□□□□ 0.73
COL20A1-205ENST00000471582 IZUMO3Q5VZ72 239 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 HIBCHQ6NVY1 386 aaPredicted RBP19.61■□□□□ 0.73
COL20A1-205ENST00000471582 APBB1IPQ7Z5R6 666 aaPredicted RBP19.61■□□□□ 0.73
COL20A1-205ENST00000471582 KIAA0319LQ8IZA0 1049 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 ALLCQ8N6M5 410 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 OR6J1Q8NGC5 347 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 NPLOC4Q8TAT6 608 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 IPO4Q8TEX9 1081 aaKnown RBP19.61■□□□□ 0.73
COL20A1-205ENST00000471582 RAPGEF5Q92565 580 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 PPP1R16BQ96T49 567 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 SYNCQ9H7C4 482 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 HMGXB4Q9UGU5 601 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 DNPEPQ9ULA0 475 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 KIAA1257Q9ULG3 409 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 BARX2Q9UMQ3 279 aaPredicted RBP19.61■□□□□ 0.73
COL20A1-205ENST00000471582 LRRD1A4D1F6 860 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 GOLGA8SH3BPF8 625 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 MICAL2O94851 1124 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 VCPP55072 806 aaKnown RBP19.6■□□□□ 0.73
COL20A1-205ENST00000471582 CDC42EP1Q00587 391 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 MAP2K5Q13163 448 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 IRF5Q13568 498 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 KAZNQ674X7 775 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 TXNRD3NBQ6F5E7 133 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 MICALCLQ6ZW33 695 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 TAOK1Q7L7X3 1001 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 ZCCHC9Q8N567 271 aaKnown RBP19.6■□□□□ 0.73
COL20A1-205ENST00000471582 MCRS1Q96EZ8 462 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 FAM118BQ9BPY3 351 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 DDX23Q9BUQ8 820 aaKnown RBP19.6■□□□□ 0.73
COL20A1-205ENST00000471582 AGAP1Q9UPQ3 857 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 DERAQ9Y315 318 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 FAM169AQ9Y6X4 670 aa19.6■□□□□ 0.73
COL20A1-205ENST00000471582 C3orf70A6NLC5 250 aaPredicted RBP19.59■□□□□ 0.73
COL20A1-205ENST00000471582 LRCH4O75427 683 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 ITGAVP06756 1048 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 VPS41P49754 854 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 OASLQ15646 514 aaKnown RBP19.59■□□□□ 0.73
COL20A1-205ENST00000471582 TAZQ16635 292 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 MORN1Q5T089 497 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 ERMARDQ5T6L9 678 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 JOSD2Q8TAC2 188 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 ADAM7Q9H2U9 754 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 PLEKHA5Q9HAU0 1116 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 DPP3Q9NY33 737 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 ZNF148Q9UQR1 794 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 CITO14578 2027 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 RALGAPA2Q2PPJ7 1873 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 RRN3P2A6NIE6 340 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 SMIM23A6NLE4 172 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 ACSL3O95573 720 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 ERBB2P04626 1255 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 ATP5DP30049 168 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 GPD2P43304 727 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 IFI35P80217 286 aaPredicted RBP19.59■□□□□ 0.73
COL20A1-205ENST00000471582 P3H1Q32P28 736 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 C17orf99Q6UX52 265 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 UHMK1Q8TAS1 419 aaKnown RBP19.59■□□□□ 0.73
COL20A1-205ENST00000471582 MIS12Q9H081 205 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 ZFYVE28Q9HCC9 887 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 TJP2Q9UDY2 1190 aa19.59■□□□□ 0.73
COL20A1-205ENST00000471582 KAT6AQ92794 2004 aa19.58■□□□□ 0.72
COL20A1-205ENST00000471582 M0QYV0 167 aa19.58■□□□□ 0.72
COL20A1-205ENST00000471582 DNALI1O14645 258 aaPredicted RBP19.58■□□□□ 0.72
COL20A1-205ENST00000471582 TOMM70O94826 608 aa19.58■□□□□ 0.72
COL20A1-205ENST00000471582 YY1P25490 414 aa19.58■□□□□ 0.72
COL20A1-205ENST00000471582 PCBP1Q15365 356 aaKnown RBP eCLIP19.58■□□□□ 0.72
COL20A1-205ENST00000471582 STILQ15468 1287 aa19.58■□□□□ 0.72
COL20A1-205ENST00000471582 ARFGAP1Q8N6T3 406 aa19.58■□□□□ 0.72
COL20A1-205ENST00000471582 TTC13Q8NBP0 860 aa19.58■□□□□ 0.72
COL20A1-205ENST00000471582 ZNF784Q8NCA9 323 aaPredicted RBP19.58■□□□□ 0.72
COL20A1-205ENST00000471582 XPO6Q96QU8 1125 aaKnown RBP19.58■□□□□ 0.72
COL20A1-205ENST00000471582 METTL5Q9NRN9 209 aaKnown RBP19.58■□□□□ 0.72
COL20A1-205ENST00000471582 NINJ2Q9NZG7 142 aa19.58■□□□□ 0.72
COL20A1-205ENST00000471582 C5orf60A6NFR6 353 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 SLCO1A2P46721 670 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 TM4SF4P48230 202 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 MYO1EQ12965 1108 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 LCLAT1Q6UWP7 414 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 YTHDF3Q7Z739 585 aaKnown RBP19.57■□□□□ 0.72
COL20A1-205ENST00000471582 SLC35B2Q8TB61 432 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 HEXIM2Q96MH2 286 aaKnown RBP19.57■□□□□ 0.72
COL20A1-205ENST00000471582 PCDH9Q9HC56 1237 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 ABHD2P08910 425 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 ORC1Q13415 861 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 KYNUQ16719 465 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 BBS12Q6ZW61 710 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 KIF12Q96FN5 646 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 ADAMTS10Q9H324 1103 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms