RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 GCNT4Q9P109 453 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 PTPRDP23468 1912 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 PRKCSHP14314 528 aaPredicted RBP18.87■□□□□ 0.61
VPS72-204ENST00000471423 BDNFP23560 247 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 GBP2P32456 591 aaPredicted RBP18.87■□□□□ 0.61
VPS72-204ENST00000471423 VEPH1Q14D04 833 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 DDR2Q16832 855 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 TCP11X2Q5H9J9 407 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 CDKAL1Q5VV42 579 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 ITIH5Q86UX2 942 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 TMC8Q8IU68 726 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 AOPEPQ8N6M6 819 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 EHBP1Q8NDI1 1231 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 STKLD1Q8NE28 680 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 ITFG1Q8TB96 612 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 ING5Q8WYH8 240 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 ACSF2Q96CM8 615 aaPredicted RBP18.87■□□□□ 0.61
VPS72-204ENST00000471423 MYADMQ96S97 322 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 NOTCH4Q99466 2003 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 TUBGCP2Q9BSJ2 902 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 FUCA2Q9BTY2 467 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 NT5C1AQ9BXI3 368 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 B3GNT5Q9BYG0 378 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 ASAH2Q9NR71 780 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 FANCLQ9NW38 375 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 ASB3Q9Y575 518 aa18.87■□□□□ 0.61
VPS72-204ENST00000471423 CLDN5O00501 218 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 CCDC130P13994 396 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 TBXAS1P24557 533 aaPredicted RBP18.86■□□□□ 0.61
VPS72-204ENST00000471423 EEF1GP26641 437 aaKnown RBP18.86■□□□□ 0.61
VPS72-204ENST00000471423 CCR2P41597 374 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 MAGEA11P43364 429 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 RPL10AP62906 217 aaKnown RBP18.86■□□□□ 0.61
VPS72-204ENST00000471423 ZNF394Q53GI3 561 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 MIIPQ5JXC2 388 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 VSTM1Q6UX27 236 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 PDZD4Q76G19 769 aaPredicted RBP18.86■□□□□ 0.61
VPS72-204ENST00000471423 ARHGEF19Q8IW93 802 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 SCN4BQ8IWT1 228 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 CRYBG2Q8N1P7 616 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 PPM1KQ8N3J5 372 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 C12orf29Q8N999 325 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 TCEAL4Q96EI5 215 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 CRACR2AQ9BSW2 395 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 MED10Q9BTT4 135 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 ZNF518BQ9C0D4 1074 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 ELOVL4Q9GZR5 314 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 NAT10Q9H0A0 1025 aaKnown RBP18.86■□□□□ 0.61
VPS72-204ENST00000471423 ZNF334Q9HCZ1 680 aaPredicted RBP18.86■□□□□ 0.61
VPS72-204ENST00000471423 AVENQ9NQS1 362 aaPredicted RBP18.86■□□□□ 0.61
VPS72-204ENST00000471423 FAM49BQ9NUQ9 324 aa18.86■□□□□ 0.61
VPS72-204ENST00000471423 MRPS23Q9Y3D9 190 aaKnown RBP18.86■□□□□ 0.61
VPS72-204ENST00000471423 PES1O00541 588 aaKnown RBP18.85■□□□□ 0.61
VPS72-204ENST00000471423 NRG2O14511 850 aaPredicted RBP18.85■□□□□ 0.61
VPS72-204ENST00000471423 MYL4P12829 197 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 CEBPBP17676 345 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 TRIM21P19474 475 aaKnown RBP18.85■□□□□ 0.61
VPS72-204ENST00000471423 CACNA2D1P54289 1103 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 EPHA5P54756 1037 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 NFKBIBQ15653 356 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 VWA3BQ502W6 1294 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 PRSS36Q5K4E3 855 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 CYP4A22Q5TCH4 519 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 DNAJB7Q7Z6W7 309 aaPredicted RBP18.85■□□□□ 0.61
VPS72-204ENST00000471423 FAM35AQ86V20 835 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 FUKQ8N0W3 1084 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 TTC39CQ8N584 583 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 KAT5Q92993 513 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 LRRC3Q9BY71 257 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 NDST4Q9H3R1 872 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 TMEM30AQ9NV96 361 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 TAB2Q9NYJ8 693 aa18.85■□□□□ 0.61
VPS72-204ENST00000471423 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.85■□□□□ 0.61
VPS72-204ENST00000471423 ATP8B3O60423 1300 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 GRIK1P39086 918 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 YWHAEP62258 255 aaKnown RBP18.84■□□□□ 0.61
VPS72-204ENST00000471423 MTMR3Q13615 1198 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 NCAPHQ15003 741 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 TAF12Q16514 161 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 ZSCAN23Q3MJ62 389 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 GBP6Q6ZN66 633 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 PAQR9Q6ZVX9 377 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 RRAGAQ7L523 313 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 RNF135Q8IUD6 432 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 NPAS3Q8IXF0 933 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 ZDHHC14Q8IZN3 488 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 UBR7Q8N806 425 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 LEMD2Q8NC56 503 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 SLC2A14Q8TDB8 520 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 FGF13Q92913 245 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 FAM124BQ9H5Z6 455 aaPredicted RBP18.84■□□□□ 0.61
VPS72-204ENST00000471423 KRT82Q9NSB4 513 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 CDH7Q9ULB5 785 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 DOCK8Q8NF50 2099 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 NCOR1O75376 2440 aa18.84■□□□□ 0.61
VPS72-204ENST00000471423 GTPBP10A4D1E9 387 aaKnown RBP18.83■□□□□ 0.6
VPS72-204ENST00000471423 F8VP50 259 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 ZNF197O14709 1029 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 TRIM66O15016 1216 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 GJA1P17302 382 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms