RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SLC16A3O15427 465 aaKnown RBP6.96□□□□□ -1.3
CCDC39-202ENST00000471307 CDK4P11802 303 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 XRCC6P12956 609 aaKnown RBP eCLIP6.96□□□□□ -1.3
CCDC39-202ENST00000471307 DRD4P21917 467 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 HTR1BP28222 390 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 PCSK6P29122 969 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 ALDH9A1P49189 494 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 WNT3P56703 355 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 PROK1P58294 105 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 FOXF2Q12947 444 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 KIAA1614Q5VZ46 1190 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 FCRLBQ6BAA4 426 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 B3GNT9Q6UX72 402 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 WDR53Q7Z5U6 358 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-202ENST00000471307 DAAM2Q86T65 1068 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 RASAL3Q86YV0 1011 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 SRRM1Q8IYB3 904 aaKnown RBP6.96□□□□□ -1.3
CCDC39-202ENST00000471307 KBTBD7Q8WVZ9 684 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 TBC1D5Q92609 795 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 MRGPRX1Q96LB2 322 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 TTYH3Q9C0H2 523 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 SERHLQ9NQF3 203 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 GABBR1Q9UBS5 961 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 ST3GAL5Q9UNP4 418 aa6.96□□□□□ -1.3
CCDC39-202ENST00000471307 POLA1P09884 1462 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-202ENST00000471307 THOC2Q8NI27 1593 aaKnown RBP6.95□□□□□ -1.3
CCDC39-202ENST00000471307 EEA1Q15075 1411 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 UBXN7O94888 489 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 EBLN1P0CF75 366 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 NDUFB7P17568 137 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 GPSM2P81274 684 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 SUMO4Q6EEV6 95 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 ZNF804AQ7Z570 1209 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 TAAR9Q96RI9 348 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 ARMT1Q9H993 441 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 ZIM2Q9NZV7 527 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 DKK3Q9UBP4 350 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 ADAM21Q9UKJ8 722 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 PADI4Q9UM07 663 aa6.95□□□□□ -1.3
CCDC39-202ENST00000471307 MYO1CO00159 1063 aa6.94□□□□□ -1.3
CCDC39-202ENST00000471307 LRPAP1P30533 357 aa6.94□□□□□ -1.3
CCDC39-202ENST00000471307 LILRA4P59901 499 aa6.94□□□□□ -1.3
CCDC39-202ENST00000471307 E2F2Q14209 437 aa6.94□□□□□ -1.3
CCDC39-202ENST00000471307 CXorf57Q6NSI4 855 aaKnown RBP6.94□□□□□ -1.3
CCDC39-202ENST00000471307 CEP85Q6P2H3 762 aa6.94□□□□□ -1.3
CCDC39-202ENST00000471307 AMIGO2Q86SJ2 522 aa6.94□□□□□ -1.3
CCDC39-202ENST00000471307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.94□□□□□ -1.3
CCDC39-202ENST00000471307 ACO2Q99798 780 aaKnown RBP6.94□□□□□ -1.3
CCDC39-202ENST00000471307 XPR1Q9UBH6 696 aa6.94□□□□□ -1.3
CCDC39-202ENST00000471307 TMX2Q9Y320 296 aa6.94□□□□□ -1.3
CCDC39-202ENST00000471307 TNFRSF18Q9Y5U5 241 aa6.94□□□□□ -1.3
CCDC39-202ENST00000471307 AOX1Q06278 1338 aa6.94□□□□□ -1.3
CCDC39-202ENST00000471307 KIF27Q86VH2 1401 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 IFT140Q96RY7 1462 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 ABCA10Q8WWZ4 1543 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 PRKCGP05129 697 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 AGFG1P52594 562 aaKnown RBP6.93□□□□□ -1.3
CCDC39-202ENST00000471307 ARFIP2P53365 341 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 EIF2B5Q13144 721 aaKnown RBP6.93□□□□□ -1.3
CCDC39-202ENST00000471307 ANO6Q4KMQ2 910 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 AARS2Q5JTZ9 985 aaKnown RBP6.93□□□□□ -1.3
CCDC39-202ENST00000471307 ARHGAP40Q5TG30 622 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 EPM2AIP1Q7L775 607 aaPredicted RBP6.93□□□□□ -1.3
CCDC39-202ENST00000471307 TPH2Q8IWU9 490 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 ANKS1AQ92625 1134 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 TRIM54Q9BYV2 358 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 CPA4Q9UI42 421 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 SSX2IPQ9Y2D8 614 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 PAXBP1Q9Y5B6 917 aa6.93□□□□□ -1.3
CCDC39-202ENST00000471307 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC39-202ENST00000471307 CUX2O14529 1486 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 RAD54L2Q9Y4B4 1467 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 JTBO76095 146 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 IL6RP08887 468 aaPredicted RBP6.92□□□□□ -1.3
CCDC39-202ENST00000471307 FAM163BP0C2L3 166 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 JUPP14923 745 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 SLC11A2P49281 568 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 ODR4Q5SWX8 454 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 ZNF783Q6ZMS7 281 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 MESP1Q9BRJ9 268 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 DPH1Q9BZG8 443 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 SERTAD3Q9UJW9 196 aa6.92□□□□□ -1.3
CCDC39-202ENST00000471307 TARBP1Q13395 1621 aaKnown RBP6.91□□□□□ -1.3
CCDC39-202ENST00000471307 A0A087WWL8 130 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 A0A1W2PPL8 197 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 WIPF3A6NGB9 483 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 LINC01548A6NM66 108 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 TARM1B6A8C7 271 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 INO80B-WBP1J3KQ70 363 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 MARCH6O60337 910 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 HNRNPCP07910 306 aaKnown RBP eCLIP6.91□□□□□ -1.3
CCDC39-202ENST00000471307 UCP3P55916 312 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 SLC10A2Q12908 348 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-202ENST00000471307 LMBRD2Q68DH5 695 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-202ENST00000471307 RGS7BPQ6MZT1 257 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-202ENST00000471307 SLC29A4Q7RTT9 530 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 MAVSQ7Z434 540 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 CELF5Q8N6W0 485 aaKnown RBP6.91□□□□□ -1.3
CCDC39-202ENST00000471307 SEMA6DQ8NFY4 1073 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 RP9Q8TA86 221 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms