RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 SRRM1Q8IYB3 904 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 ATG4AQ8WYN0 398 aa6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 MAML1Q92585 1016 aa6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 ANKS1AQ92625 1134 aa6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 PTDSS2Q9BVG9 487 aa6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 SARS2Q9NP81 518 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 DLL3Q9NYJ7 618 aa6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 NDRG4Q9ULP0 352 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 NOB1Q9ULX3 412 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 A0A087WWL8 130 aa6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 IL6RP08887 468 aaPredicted RBP6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 VIPR2P41587 438 aa6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 CLCN2P51788 898 aa6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 HNRNPA0Q13151 305 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 CTBP1Q13363 440 aa6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 BMPR2Q13873 1038 aa6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 IQCB1Q15051 598 aa6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 ODR4Q5SWX8 454 aa6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 ICE2Q659A1 982 aa6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 NELL2Q99435 816 aa6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 B3GNT5Q9BYG0 378 aa6.27□□□□□ -1.41
PRPF40A-206ENST00000471167 MANSC4A6NHS7 340 aaPredicted RBP6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 TMEM233B4DJY2 109 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 SCGB1D2O95969 90 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 ATXN1LP0C7T5 689 aaKnown RBP6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 KITP10721 976 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 GPD1P21695 349 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 CCT8P50990 548 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 LOXL3P58215 753 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 ARHGAP40Q5TG30 622 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 KIAA0319LQ8IZA0 1049 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 IL31RAQ8NI17 732 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 NELL1Q92832 810 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 CXorf36Q9H7Y0 433 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 ARHGEF3Q9NR81 526 aa6.26□□□□□ -1.41
PRPF40A-206ENST00000471167 USP19O94966 1318 aa6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 ARID4BQ4LE39 1312 aaPredicted RBP6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 H0YIZ8 118 aa6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 MYO1FO00160 1098 aa6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 KCNJ5P48544 419 aa6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 PXNP49023 591 aaPredicted RBP6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 MYO1EQ12965 1108 aa6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 ANO6Q4KMQ2 910 aa6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 TREML2Q5T2D2 321 aa6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 RGS7BPQ6MZT1 257 aaPredicted RBP6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 ZNF551Q7Z340 670 aaPredicted RBP6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 C22orf23Q9BZE7 217 aa6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 STK32BQ9NY57 414 aa6.25□□□□□ -1.41
PRPF40A-206ENST00000471167 TTLL1O95922 423 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 HNRNPCP07910 306 aaKnown RBP eCLIP6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 EBLN1P0CF75 366 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 PPIFP30405 207 aaKnown RBP6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 ATXN1P54253 815 aaKnown RBP6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 SOX10P56693 466 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 KRTAP1-1Q07627 177 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 FAM102BQ5T8I3 360 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 DAAM2Q86T65 1068 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 SLC15A4Q8N697 577 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 DNAJC5GQ8N7S2 189 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 KBTBD7Q8WVZ9 684 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 DDB2Q92466 427 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 GLG1Q92896 1179 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 MTFMTQ96DP5 389 aaKnown RBP6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 MACROD1Q9BQ69 325 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 PIH1D1Q9NWS0 290 aaKnown RBP6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 DDX20Q9UHI6 824 aaKnown RBP6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 TBC1D30Q9Y2I9 924 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 EID1Q9Y6B2 187 aa6.24□□□□□ -1.41
PRPF40A-206ENST00000471167 GCOM1H8Y6P7 765 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 BTN3A1O00481 513 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 TBX3O15119 743 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 CTNND1O60716 968 aaKnown RBP6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 LATS1O95835 1130 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 THP07101 528 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 FESP07332 822 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 ADORA2AP29274 412 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 LY6KQ17RY6 165 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 AMOTQ4VCS5 1084 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 ZNF618Q5T7W0 954 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 ZKSCAN2Q63HK3 967 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 FCRLBQ6BAA4 426 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 SFRP4Q6FHJ7 346 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 ZNF782Q6ZMW2 699 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 GAS2L3Q86XJ1 694 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 ATRIPQ8WXE1 791 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 TMEM60Q9H2L4 133 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 L1RE1Q9UN81 338 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 TMX2Q9Y320 296 aa6.23□□□□□ -1.41
PRPF40A-206ENST00000471167 A1L4Q6 167 aa6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 TARM1B6A8C7 271 aa6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 SLC16A3O15427 465 aaKnown RBP6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 KCNA3P22001 575 aa6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 GALEQ14376 348 aa6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 LLGL1Q15334 1064 aa6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 CXorf57Q6NSI4 855 aaKnown RBP6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 APOA5Q6Q788 366 aa6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 MAEAQ7L5Y9 396 aa6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 MICU3Q86XE3 530 aa6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 CERS3Q8IU89 383 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms