RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 UBA3Q8TBC4 463 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 MYCBPAPQ8TBZ2 947 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 RFFLQ8WZ73 363 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 SMARCD1Q96GM5 515 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 HNRNPABQ99729 332 aaKnown RBP10.33□□□□□ -0.76
CCM2-204ENST00000470837 C11orf70Q9BRQ4 267 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 GPR62Q9BZJ7 368 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 UBE2OQ9C0C9 1292 aaKnown RBP10.33□□□□□ -0.76
CCM2-204ENST00000470837 THAP2Q9H0W7 228 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 MARCH5Q9NX47 278 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 TAS2R14Q9NYV8 317 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 WDR35Q9P2L0 1181 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 HCSTQ9UBK5 93 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 CNOT8Q9UFF9 292 aaKnown RBP10.33□□□□□ -0.76
CCM2-204ENST00000470837 GTF3C4Q9UKN8 822 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 ANK1P16157 1881 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 A0A0A6YYK5 440 aaPredicted RBP10.32□□□□□ -0.76
CCM2-204ENST00000470837 FAM170AA1A519 330 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 PJA2O43164 708 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 HCRTO43612 131 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 LPXNO60711 386 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 ATP2C2O75185 946 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 AP1G2O75843 785 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 SOD2P04179 222 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 NPR3P17342 541 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 MMP8P22894 467 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 IGFBP6P24592 240 aaPredicted RBP10.32□□□□□ -0.76
CCM2-204ENST00000470837 CDH5P33151 784 aaPredicted RBP10.32□□□□□ -0.76
CCM2-204ENST00000470837 GLUD2P49448 558 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 ARPP19P56211 112 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 PDCLQ13371 301 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 SLC39A12Q504Y0 691 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 ZNF569Q5MCW4 686 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 DNAJC24Q6P3W2 148 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 DCUN1D2Q6PH85 259 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 MMS22LQ6ZRQ5 1243 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 DDX53Q86TM3 631 aaKnown RBP10.32□□□□□ -0.76
CCM2-204ENST00000470837 PALB2Q86YC2 1186 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 SYCE1Q8N0S2 351 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 TRIM58Q8NG06 486 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 STK32AQ8WU08 396 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 RIN2Q8WYP3 895 aaPredicted RBP10.32□□□□□ -0.76
CCM2-204ENST00000470837 ZNF592Q92610 1267 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 MYLPFQ96A32 169 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 C18orf8Q96DM3 657 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 PCED1BQ96HM7 432 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 ZSWIM1Q9BR11 485 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 PACSIN1Q9BY11 444 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 DUSP16Q9BY84 665 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 LACRTQ9GZZ8 138 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 RC3H2Q9HBD1 1191 aaKnown RBP10.32□□□□□ -0.76
CCM2-204ENST00000470837 LRRC4Q9HBW1 653 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 KRT82Q9NSB4 513 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 PARVAQ9NVD7 372 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 UVRAGQ9P2Y5 699 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 LCMT1Q9UIC8 334 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 TTC3P53804 2025 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 SCN5AQ14524 2016 aa10.32□□□□□ -0.76
CCM2-204ENST00000470837 MYBPHLA2RUH7 354 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 C2CD2LO14523 706 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 XPO1O14980 1071 aaKnown RBP10.31□□□□□ -0.76
CCM2-204ENST00000470837 BUB1O43683 1085 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 FGF18O76093 207 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 CFHP08603 1231 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 TNNT1P13805 278 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 CASQ1P31415 396 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 CTNNB1P35222 781 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 GPD2P43304 727 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 TAP1Q03518 808 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 PDE4CQ08493 712 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 PSMD5Q16401 504 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 MON1BQ7L1V2 547 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 FAM35AQ86V20 835 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 ZDHHC17Q8IUH5 632 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 VPS52Q8N1B4 723 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 SIX6OS1Q8N1H7 587 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 KIF18AQ8NI77 898 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 SLC35G2Q8TBE7 412 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 C2orf15Q8WU43 125 aaKnown RBP10.31□□□□□ -0.76
CCM2-204ENST00000470837 HSFY1Q96LI6 401 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 SELENOOQ9BVL4 669 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 HERC2P3Q9BVR0 1158 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 NUP85Q9BW27 656 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 PLVAPQ9BX97 442 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 B3GNT5Q9BYG0 378 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 ZCWPW1Q9H0M4 648 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 DMAP1Q9NPF5 467 aaPredicted RBP10.31□□□□□ -0.76
CCM2-204ENST00000470837 CRTAC1Q9NQ79 661 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 CYLDQ9NQC7 956 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 AVENQ9NQS1 362 aaPredicted RBP10.31□□□□□ -0.76
CCM2-204ENST00000470837 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.31□□□□□ -0.76
CCM2-204ENST00000470837 MRPL17Q9NRX2 175 aaKnown RBP10.31□□□□□ -0.76
CCM2-204ENST00000470837 ABI2Q9NYB9 513 aaPredicted RBP10.31□□□□□ -0.76
CCM2-204ENST00000470837 PCDH10Q9P2E7 1040 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 NENFQ9UMX5 172 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 PAXBP1Q9Y5B6 917 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 PCDHB5Q9Y5E4 795 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 NCANO14594 1321 aa10.31□□□□□ -0.76
CCM2-204ENST00000470837 TET1Q8NFU7 2136 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 RCCD1A6NED2 376 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms