RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 ASB7Q9H672 318 aa13.82□□□□□ -0.2
TRAPPC12-216ENST00000469400 TRPC7Q9HCX4 862 aa13.82□□□□□ -0.2
TRAPPC12-216ENST00000469400 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-216ENST00000469400 DPP3Q9NY33 737 aa13.82□□□□□ -0.2
TRAPPC12-216ENST00000469400 LIMCH1Q9UPQ0 1083 aa13.82□□□□□ -0.2
TRAPPC12-216ENST00000469400 C2CD2Q9Y426 696 aa13.82□□□□□ -0.2
TRAPPC12-216ENST00000469400 TSC2P49815 1807 aa13.82□□□□□ -0.2
TRAPPC12-216ENST00000469400 CACNA1EQ15878 2313 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 AKAP13Q12802 2813 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 ASCC3Q8N3C0 2202 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 ANTXRLA6NF34 631 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 KPNA7A9QM74 516 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 K7ENM7 598 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 NOL4O94818 638 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 SCP2P22307 547 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 DHPSP49366 369 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 HMGN5P82970 282 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 RING1Q06587 406 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 USP4Q13107 963 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 DDR2Q16832 855 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 C2orf27AQ580R0 203 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 LRSAM1Q6UWE0 723 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 EFCAB13Q8IY85 973 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 MYCT1Q8N699 235 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 MDGA1Q8NFP4 955 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 PIGKQ92643 395 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 CNOT6LQ96LI5 555 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 REEP2Q9BRK0 252 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 LINC00597Q9H2U6 94 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 TMEM206Q9H813 350 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 UXTQ9UBK9 157 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 ODF2LQ9ULJ1 636 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 SCN1AP35498 2009 aa13.81□□□□□ -0.2
TRAPPC12-216ENST00000469400 NUP205Q92621 2012 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 TRAV19A0A0A6YYK7 116 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 ANKRD63C9JTQ0 380 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 K7EQS6 105 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 HYAL3O43820 417 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 CKMP06732 381 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 USP17L7P0C7H9 530 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 CYP2F1P24903 491 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 SEC13P55735 322 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 TSPY1Q01534 308 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 LMAN2Q12907 356 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 NR1H3Q13133 447 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 NFE2Q16621 373 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 TMEM119Q4V9L6 283 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 TRIM61Q5EBN2 209 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 ARL14EPQ8N8R7 260 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 TRMT2BQ96GJ1 504 aaKnown RBP13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 CDK5RAP3Q96JB5 506 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 MYRFLQ96LU7 910 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 GCNT4Q9P109 453 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 EVLQ9UI08 416 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 NEUROG3Q9Y4Z2 214 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 ANK1P16157 1881 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 DENND4CQ5VZ89 1909 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 MYH11P35749 1972 aa13.8□□□□□ -0.2
TRAPPC12-216ENST00000469400 GON4LQ3T8J9 2241 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 WDFY3Q8IZQ1 3526 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 TISP43B9A030 160 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 TRAK2O60296 914 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 FAM13AO94988 1023 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 OPRD1P41143 372 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 ZNF131P52739 623 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 RPL10AP62906 217 aaKnown RBP13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 ATP2C1P98194 919 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 CRY1Q16526 586 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 SV2CQ496J9 727 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 ZC2HC1CQ53FD0 456 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 ADALQ6DHV7 355 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 GPBP1Q86WP2 473 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 TTC30AQ86WT1 665 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 CCDC33Q8N5R6 958 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 OLIG1Q8TAK6 271 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 SH3RF2Q8TEC5 729 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 LRRC15Q8TF66 581 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 LEO1Q8WVC0 666 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 SLC32A1Q9H598 525 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 PARVGQ9HBI0 331 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 ABCB6Q9NP58 842 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 MMP17Q9ULZ9 603 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 LHX6Q9UPM6 363 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 MSRB2Q9Y3D2 182 aa13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 ZNF638Q14966 1978 aaKnown RBP13.79□□□□□ -0.2
TRAPPC12-216ENST00000469400 THADAQ6YHU6 1953 aa13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 PCNX2A6NKB5 2137 aa13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 VWA3AA6NCI4 1184 aa13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 C2orf78A6NCI8 922 aa13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 TNFRSF10BO14763 440 aa13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 HNRNPLP14866 589 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 ACAT1P24752 427 aaKnown RBP13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 MAPK8P45983 427 aa13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 GTF2BQ00403 316 aa13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 DHX8Q14562 1220 aaKnown RBP13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 TMEM92Q6UXU6 159 aa13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 LPCAT2Q7L5N7 544 aa13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 RLN3Q8WXF3 142 aa13.78□□□□□ -0.2
TRAPPC12-216ENST00000469400 FNBP1Q96RU3 617 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms