RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 OLA1Q9NTK5 396 aaKnown RBP4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 TBC1D22BQ9NU19 505 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 TMOD4Q9NZQ9 345 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 POGKQ9P215 609 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 AASSQ9UDR5 926 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 AGAP1Q9UPQ3 857 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 JAG2Q9Y219 1238 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 TMEM98Q9Y2Y6 226 aa4.25□□□□□ -1.73
HMGB1P25-201ENST00000468402 NCAPD3P42695 1498 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 A0A087WZ62 844 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 UBE2QL1A1L167 161 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 A6NCN8 305 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 CCNT2O60583 730 aaKnown RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 PIAS2O75928 621 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 GFPT2O94808 682 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 CHEK2O96017 543 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 CYP2C9P11712 490 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 JUPP14923 745 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 EGR1P18146 543 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 CAPN3P20807 821 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 CST5P28325 142 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 SLC6A4P31645 630 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 PRKAG1P54619 331 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 PRKAA2P54646 552 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 EPHB3P54753 998 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 NAP1L1P55209 391 aaKnown RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 TLE2Q04725 743 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 UBE3AQ05086 875 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 NSUN2Q08J23 767 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 SCAPQ12770 1279 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 MRPL49Q13405 166 aaKnown RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 IQCB1Q15051 598 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 SURF1Q15526 300 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 FAM214AQ32MH5 1076 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 MGAT5BQ3V5L5 792 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 GAGE13Q4V321 117 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 ATXN7L2Q5T6C5 722 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 AGAP9Q5VTM2 703 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 MCTP2Q6DN12 878 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 MRNIPQ6NTE8 343 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 RINT1Q6NUQ1 792 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 SLC30A10Q6XR72 485 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 ATG4DQ86TL0 474 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 XYLT1Q86Y38 959 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 CPOQ8IVL8 374 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 IGDCC3Q8IVU1 814 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 SLC44A2Q8IWA5 706 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 REXO1L1PQ8IX06 675 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 TMEM57Q8N5G2 664 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 FITM2Q8N6M3 262 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 TMIEQ8NEW7 156 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 CEP70Q8NHQ1 597 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 CPT1CQ8TCG5 803 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 FNIP1Q8TF40 1166 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 NUP133Q8WUM0 1156 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 CFHR4Q92496 578 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 HTRA1Q92743 480 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 TFAP2CQ92754 450 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 OSBPL5Q9H0X9 879 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 KCNH6Q9H252 994 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 PABPC3Q9H361 631 aaKnown RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 C12orf65Q9H3J6 166 aaKnown RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 ELAC1Q9H777 363 aaKnown RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZBTB26Q9HCK0 441 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 IL23AQ9NPF7 189 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 FBXO34Q9NWN3 711 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 MBD1Q9UIS9 605 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 ATP11BQ9Y2G3 1177 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 NR2E1Q9Y466 385 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 TOP2BQ02880 1626 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 RAD54L2Q9Y4B4 1467 aa4.24□□□□□ -1.73
HMGB1P25-201ENST00000468402 A0A1W2PRX2 142 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 ANKRD18BA2A2Z9 1011 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 AQP7P3A6NL99 342 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 PRR5-ARHGAP8B1AHC4 643 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 B4E171 279 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 K7ENM7 598 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 POLRMTO00411 1230 aaKnown RBP4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 PRRG2O14669 202 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZSCAN9O15535 394 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 TBX18O95935 607 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 VIPP01282 170 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 ITGB1P05556 798 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZSCAN22P10073 491 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZNF28P17035 718 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 CHRM3P20309 590 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 TSPAN7P41732 249 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 ACTR2P61160 394 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 FSTL1Q12841 308 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 DUSP8Q13202 625 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 ANKS6Q68DC2 871 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 TTLL5Q6EMB2 1281 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 EFCAB12Q6NXP0 572 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 DSTYKQ6XUX3 929 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 KIAA0408Q6ZU52 694 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 KCTD20Q7Z5Y7 419 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 KRT73Q86Y46 540 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 NRSN1Q8IZ57 195 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 SIMC1Q8NDZ2 872 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms