RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PCED1BQ96HM7 432 aa16.2■□□□□ 0.18
ATG4B-215ENST00000468018 DHTKD1Q96HY7 919 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-215ENST00000468018 CEP295NLQ96MC4 621 aa16.2■□□□□ 0.18
ATG4B-215ENST00000468018 KXD1Q9BQD3 176 aa16.2■□□□□ 0.18
ATG4B-215ENST00000468018 BCO2Q9BYV7 579 aa16.2■□□□□ 0.18
ATG4B-215ENST00000468018 SMYD3Q9H7B4 428 aa16.2■□□□□ 0.18
ATG4B-215ENST00000468018 NXF1Q9UBU9 619 aaKnown RBP16.2■□□□□ 0.18
ATG4B-215ENST00000468018 TRIM49BA6NDI0 452 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 PPP1R3GB7ZBB8 358 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 TADA3O75528 432 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 CFHP08603 1231 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 PDGFRBP09619 1106 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 CSH1P0DML2 217 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 CSH2P0DML3 217 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 CDC25CP30307 473 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 AVPR2P30518 371 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 PPP1R2P41236 205 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 ASPAP45381 313 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 GCLMP48507 274 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 RPL10AP62906 217 aaKnown RBP16.19■□□□□ 0.18
ATG4B-215ENST00000468018 VSTM1Q6UX27 236 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 VITQ6UXI7 678 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 SPATA2LQ8IUW3 424 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-215ENST00000468018 SUGP1Q8IWZ8 645 aaKnown RBP16.19■□□□□ 0.18
ATG4B-215ENST00000468018 OR6B3Q8NGW1 331 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 ZSCAN18Q8TBC5 510 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-215ENST00000468018 TAS1R2Q8TE23 839 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 GIPC2Q8TF65 315 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 ELMO3Q96BJ8 720 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 EEF2KMTQ96G04 330 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 TRMT2BQ96GJ1 504 aaKnown RBP16.19■□□□□ 0.18
ATG4B-215ENST00000468018 DPEP3Q9H4B8 488 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 APOBEC3GQ9HC16 384 aaKnown RBP16.19■□□□□ 0.18
ATG4B-215ENST00000468018 ZFP14Q9HCL3 533 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 TMEM8AQ9HCN3 771 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 CACNA1HO95180 2353 aa16.19■□□□□ 0.18
ATG4B-215ENST00000468018 SOBPA7XYQ1 873 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 LRRN2O75325 713 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 EPB41P11171 864 aaKnown RBP16.18■□□□□ 0.18
ATG4B-215ENST00000468018 KRT13P13646 458 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 PTPN1P18031 435 aaKnown RBP16.18■□□□□ 0.18
ATG4B-215ENST00000468018 CLCN5P51795 746 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 NUBP1P53384 320 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 CDH8P55286 799 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 NLRP12P59046 1061 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 DDR2Q16832 855 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 IER5LQ5T953 404 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 SDHAF4Q5VUM1 108 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 KRT39Q6A163 491 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 SPOPLQ6IQ16 392 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 SIX5Q8N196 739 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 TMEM105Q8N8V8 129 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 B3GALNT2Q8NCR0 500 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 STKLD1Q8NE28 680 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 RSPRY1Q96DX4 576 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 SPATA17Q96L03 361 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 TSG101Q99816 390 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 DDX23Q9BUQ8 820 aaKnown RBP16.18■□□□□ 0.18
ATG4B-215ENST00000468018 SNX25Q9H3E2 840 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 ATXN3LQ9H3M9 355 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 TMEM30AQ9NV96 361 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 MAGEC2Q9UBF1 373 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-215ENST00000468018 ZMYM5Q9UJ78 669 aa16.18■□□□□ 0.18
ATG4B-215ENST00000468018 A8MXQ7 604 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 ARNTLO00327 626 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 PSMA7O14818 248 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 AOC1P19801 751 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 BDNFP23560 247 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 PIK3CAP42336 1068 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 RAP1GAPP47736 663 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 STARD6P59095 220 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 NOP14P78316 857 aaKnown RBP16.17■□□□□ 0.18
ATG4B-215ENST00000468018 INCA1Q0VD86 236 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 MDH1BQ5I0G3 518 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 ISM2Q6H9L7 571 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 ASTLQ6HA08 431 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-215ENST00000468018 PHLDB3Q6NSJ2 640 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 TTI2Q6NXR4 508 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 TRIML1Q8N9V2 468 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 FAM200AQ8TCP9 573 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 DEPDC1BQ8WUY9 529 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 E2F7Q96AV8 911 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 FAXDC2Q96IV6 333 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 DUSP9Q99956 384 aaKnown RBP16.17■□□□□ 0.18
ATG4B-215ENST00000468018 TASP1Q9H6P5 420 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 TRPV5Q9NQA5 729 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 ARHGEF3Q9NR81 526 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 OBP2AQ9NY56 170 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 FBXL21Q9UKT6 434 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 COQ4Q9Y3A0 265 aa16.17■□□□□ 0.18
ATG4B-215ENST00000468018 MYO16Q9Y6X6 1858 aa16.16■□□□□ 0.18
ATG4B-215ENST00000468018 SHISA7A6NL88 538 aa16.16■□□□□ 0.18
ATG4B-215ENST00000468018 SLC38A8A6NNN8 435 aa16.16■□□□□ 0.18
ATG4B-215ENST00000468018 PSMC3P17980 439 aa16.16■□□□□ 0.18
ATG4B-215ENST00000468018 VIPR2P41587 438 aa16.16■□□□□ 0.18
ATG4B-215ENST00000468018 CACNA2D1P54289 1103 aa16.16■□□□□ 0.18
ATG4B-215ENST00000468018 CYP4F8P98187 520 aa16.16■□□□□ 0.18
ATG4B-215ENST00000468018 PFKPQ01813 784 aa16.16■□□□□ 0.18
ATG4B-215ENST00000468018 FCHO2Q0JRZ9 810 aa16.16■□□□□ 0.18
ATG4B-215ENST00000468018 STIM1Q13586 685 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms