RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 ELMO3Q96BJ8 720 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 EYA3Q99504 573 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 THTPAQ9BU02 230 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 VPS37BQ9H9H4 285 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 C6orf203Q9P0P8 240 aaPredicted RBP11.58□□□□□ -0.56
SFXN3-204ENST00000466982 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.58□□□□□ -0.56
SFXN3-204ENST00000466982 ROBO3Q96MS0 1386 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 USP17L15C9J2P7 530 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 USP17L13C9JLJ4 530 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 USP17L11C9JVI0 530 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 USP17L18D6R9N7 530 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 USP17L22D6RA61 530 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 USP17L17D6RBQ6 530 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 USP17L19D6RCP7 530 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 USP17L20D6RJB6 530 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 FCHO1O14526 889 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 KCNQ2O43526 872 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 CALCAP01258 141 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 ARL4CP56559 192 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 NOP14P78316 857 aaKnown RBP11.58□□□□□ -0.56
SFXN3-204ENST00000466982 KDSRQ06136 332 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 USP17L24Q0WX57 530 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 ITGA9Q13797 1035 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 FAM117BQ6P1L5 589 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 CCDC62Q6P9F0 684 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 USP17L6PQ6QN14 398 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 SLC30A10Q6XR72 485 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 NOP9Q86U38 636 aaKnown RBP11.58□□□□□ -0.56
SFXN3-204ENST00000466982 TXNRD3Q86VQ6 643 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 TCP10LQ8TDR4 215 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 PYDC1Q8WXC3 89 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 RIOX1Q9H6W3 641 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 SLC7A8Q9UHI5 535 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 MINPP1Q9UNW1 487 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 SMG5Q9UPR3 1016 aaKnown RBP11.58□□□□□ -0.56
SFXN3-204ENST00000466982 TMA7Q9Y2S6 64 aaKnown RBP11.58□□□□□ -0.56
SFXN3-204ENST00000466982 NEU2Q9Y3R4 380 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 TRIM17Q9Y577 477 aa11.58□□□□□ -0.56
SFXN3-204ENST00000466982 FAM237BA0A1B0GVD1 139 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 A8MXQ7 604 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 VILLO15195 856 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 STRNO43815 780 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 ADAM23O75077 832 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 CDK16Q00536 496 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 MYL7Q01449 175 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 GRIK5Q16478 980 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 LLGL2Q6P1M3 1020 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 FAM20CQ8IXL6 584 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 LRRC47Q8N1G4 583 aaKnown RBP11.57□□□□□ -0.56
SFXN3-204ENST00000466982 LMO3Q8TAP4 145 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 TRIM55Q9BYV6 548 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 OSBPL8Q9BZF1 889 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 HBS1LQ9Y450 684 aaKnown RBP11.57□□□□□ -0.56
SFXN3-204ENST00000466982 WNK3Q9BYP7 1800 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 LOC105371267A0A1B0GV96 52 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 SMIM31A0A1B0GVY4 71 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 CCDC160A6NGH7 325 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 ERVV-1B6SEH8 477 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 ONECUT3O60422 494 aaPredicted RBP11.57□□□□□ -0.56
SFXN3-204ENST00000466982 LDHCP07864 332 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 SPATA31C1P0DKV0 1188 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 MYL2P10916 166 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 ETS1P14921 441 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 HIRAP54198 1017 aaPredicted RBP11.57□□□□□ -0.56
SFXN3-204ENST00000466982 AQP4P55087 323 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 SUZ12Q15022 739 aaKnown RBP11.57□□□□□ -0.56
SFXN3-204ENST00000466982 C2CD6Q53TS8 623 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 RBM44Q6ZP01 1051 aaKnown RBP11.57□□□□□ -0.56
SFXN3-204ENST00000466982 ACAD11Q709F0 780 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 PATL1Q86TB9 770 aaKnown RBP11.57□□□□□ -0.56
SFXN3-204ENST00000466982 SPERTQ8NA61 448 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 OR6Y1Q8NGX8 325 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 CEP44Q9C0F1 390 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 MANSC1Q9H8J5 431 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 NDUFA13Q9P0J0 144 aa11.57□□□□□ -0.56
SFXN3-204ENST00000466982 RGS17Q9UGC6 210 aaPredicted RBP11.57□□□□□ -0.56
SFXN3-204ENST00000466982 E5RJQ4 531 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 GOLGA8TH3BQL2 631 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 CYP26A1O43174 497 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 DLDP09622 509 aaKnown RBP11.56□□□□□ -0.56
SFXN3-204ENST00000466982 SLC16A2P36021 539 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 RAP1GDS1P52306 607 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 TUBA4AP68366 448 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 MED21Q13503 144 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 RASA2Q15283 850 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 GPR162Q16538 588 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 C1orf146Q5VVC0 180 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 FBXO33Q7Z6M2 555 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 SLC47A2Q86VL8 602 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 MCF2L2Q86YR7 1114 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 ULK2Q8IYT8 1036 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 NUP93Q8N1F7 819 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.56□□□□□ -0.56
SFXN3-204ENST00000466982 TTC25Q96NG3 672 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 TSSK1BQ9BXA7 367 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 FHDC1Q9C0D6 1143 aaPredicted RBP11.56□□□□□ -0.56
SFXN3-204ENST00000466982 PCDHGB4Q9UN71 923 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 DNM3Q9UQ16 869 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 PCDHGB5Q9Y5G0 923 aa11.56□□□□□ -0.56
SFXN3-204ENST00000466982 TXNDC9O14530 226 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms