RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 MKNK1Q9BUB5 465 aa12.61□□□□□ -0.39
EDEM3-204ENST00000466392 ATXN3LQ9H3M9 355 aa12.61□□□□□ -0.39
EDEM3-204ENST00000466392 SLITRK6Q9H5Y7 841 aa12.61□□□□□ -0.39
EDEM3-204ENST00000466392 VRTNQ9H8Y1 702 aa12.61□□□□□ -0.39
EDEM3-204ENST00000466392 TMEM30AQ9NV96 361 aa12.61□□□□□ -0.39
EDEM3-204ENST00000466392 KIAA1468Q9P260 1216 aa12.61□□□□□ -0.39
EDEM3-204ENST00000466392 HSFX1Q9UBD0 423 aa12.61□□□□□ -0.39
EDEM3-204ENST00000466392 COL4A2P08572 1712 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 KIF26AQ9ULI4 1882 aaPredicted RBP12.6□□□□□ -0.39
EDEM3-204ENST00000466392 ZNF197O14709 1029 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 HMGA1P17096 107 aaKnown RBP12.6□□□□□ -0.39
EDEM3-204ENST00000466392 PTPN1P18031 435 aaKnown RBP12.6□□□□□ -0.39
EDEM3-204ENST00000466392 VIPR2P41587 438 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 MXI1P50539 228 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 NOP14P78316 857 aaKnown RBP12.6□□□□□ -0.39
EDEM3-204ENST00000466392 GPC5P78333 572 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 SMARCB1Q12824 385 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 GRM2Q14416 872 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 VEPH1Q14D04 833 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 TAF12Q16514 161 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 UBALD2Q8IYN6 164 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 B3GALNT2Q8NCR0 500 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
EDEM3-204ENST00000466392 TWNKQ96RR1 684 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 ZNF518BQ9C0D4 1074 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 IL21Q9HBE4 155 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 TMEM8AQ9HCN3 771 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 MAGEC2Q9UBF1 373 aaPredicted RBP12.6□□□□□ -0.39
EDEM3-204ENST00000466392 CA14Q9ULX7 337 aa12.6□□□□□ -0.39
EDEM3-204ENST00000466392 ZFP37Q9Y6Q3 630 aaPredicted RBP12.6□□□□□ -0.39
EDEM3-204ENST00000466392 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 SLC38A8A6NNN8 435 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 SLC16A3O15427 465 aaKnown RBP12.59□□□□□ -0.39
EDEM3-204ENST00000466392 CD58P19256 250 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 NDST1P52848 882 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 VCPP55072 806 aaKnown RBP12.59□□□□□ -0.39
EDEM3-204ENST00000466392 PAK1Q13153 545 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 CFAP221Q4G0U5 840 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 CCDC40Q4G0X9 1142 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 GPR158Q5T848 1215 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 KRT39Q6A163 491 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 CLEC17AQ6ZS10 378 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 MTSS1LQ765P7 747 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 TMEM150AQ86TG1 271 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 ACOT1Q86TX2 421 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 ITIH5Q86UX2 942 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 SIX5Q8N196 739 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 MYCBPAPQ8TBZ2 947 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 SLC35C1Q96A29 364 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 RSPRY1Q96DX4 576 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 ASB16Q96NS5 453 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 MED15Q96RN5 788 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 B3GNT5Q9BYG0 378 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 SMG9Q9H0W8 520 aaKnown RBP12.59□□□□□ -0.39
EDEM3-204ENST00000466392 GDE1Q9NZC3 331 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 ARMCX3Q9UH62 379 aaPredicted RBP12.59□□□□□ -0.39
EDEM3-204ENST00000466392 FBXL21Q9UKT6 434 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 ASB3Q9Y575 518 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 PATJQ8NI35 1801 aa12.59□□□□□ -0.39
EDEM3-204ENST00000466392 KRBA1A5PL33 1030 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 TADA3O75528 432 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 SRFP11831 508 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 CCDC130P13994 396 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 GRIK1P39086 918 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 USP46P62068 366 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 LRMPQ12912 555 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 VITQ6UXI7 678 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 C4orf50Q6ZRC1 276 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 C12orf29Q8N999 325 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 LEMD2Q8NC56 503 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 FLCNQ8NFG4 579 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 TAF4BQ92750 862 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 SMARCD2Q92925 531 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 TATDN2Q93075 761 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 FUBP3Q96I24 572 aaKnown RBP eCLIP12.58□□□□□ -0.4
EDEM3-204ENST00000466392 ARID3AQ99856 593 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 BCO2Q9BYV7 579 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 GTPBP4Q9BZE4 634 aaKnown RBP12.58□□□□□ -0.4
EDEM3-204ENST00000466392 IMPG2Q9BZV3 1241 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 ABCB6Q9NP58 842 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 FAM49BQ9NUQ9 324 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 RAB20Q9NX57 234 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 HELZP42694 1942 aaKnown RBP12.58□□□□□ -0.4
EDEM3-204ENST00000466392 ZNF318Q5VUA4 2279 aa12.58□□□□□ -0.4
EDEM3-204ENST00000466392 F8VP50 259 aa12.57□□□□□ -0.4
EDEM3-204ENST00000466392 MICAL2O94851 1124 aa12.57□□□□□ -0.4
EDEM3-204ENST00000466392 PRAMEF12O95522 483 aa12.57□□□□□ -0.4
EDEM3-204ENST00000466392 F11P03951 625 aa12.57□□□□□ -0.4
EDEM3-204ENST00000466392 CSH1P0DML2 217 aa12.57□□□□□ -0.4
EDEM3-204ENST00000466392 CSH2P0DML3 217 aa12.57□□□□□ -0.4
EDEM3-204ENST00000466392 P4HA1P13674 534 aa12.57□□□□□ -0.4
EDEM3-204ENST00000466392 GTF2H1P32780 548 aa12.57□□□□□ -0.4
EDEM3-204ENST00000466392 PPP1R2P41236 205 aa12.57□□□□□ -0.4
EDEM3-204ENST00000466392 NLRP12P59046 1061 aa12.57□□□□□ -0.4
EDEM3-204ENST00000466392 MCCD1P59942 119 aaPredicted RBP12.57□□□□□ -0.4
EDEM3-204ENST00000466392 RPL10AP62906 217 aaKnown RBP12.57□□□□□ -0.4
EDEM3-204ENST00000466392 IFRD2Q12894 506 aaPredicted RBP12.57□□□□□ -0.4
EDEM3-204ENST00000466392 MAPRE1Q15691 268 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms