RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 NRDE2Q9H7Z3 1164 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 RBM12Q9NTZ6 932 aaKnown RBP19.72■□□□□ 0.75
CAPN3-209ENST00000466222 GOLGA6CA6NDK9 693 aa19.71■□□□□ 0.75
CAPN3-209ENST00000466222 A8MXQ7 604 aa19.71■□□□□ 0.75
CAPN3-209ENST00000466222 HSF2BPO75031 334 aa19.71■□□□□ 0.75
CAPN3-209ENST00000466222 FTLP02792 175 aaPredicted RBP19.71■□□□□ 0.75
CAPN3-209ENST00000466222 GOLGA6DP0CG33 693 aa19.71■□□□□ 0.75
CAPN3-209ENST00000466222 CXCR5P32302 372 aa19.71■□□□□ 0.75
CAPN3-209ENST00000466222 GALCP54803 685 aa19.71■□□□□ 0.75
CAPN3-209ENST00000466222 YWHAEP62258 255 aaKnown RBP19.71■□□□□ 0.75
CAPN3-209ENST00000466222 DSTYKQ6XUX3 929 aa19.71■□□□□ 0.75
CAPN3-209ENST00000466222 NPAS4Q8IUM7 802 aa19.71■□□□□ 0.75
CAPN3-209ENST00000466222 HDAC7Q8WUI4 952 aa19.71■□□□□ 0.75
CAPN3-209ENST00000466222 GOLGA6AQ9NYA3 693 aa19.71■□□□□ 0.75
CAPN3-209ENST00000466222 NT5C1B-RDH14C9J2C7 533 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 ATP2C2O75185 946 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 ACAT1P24752 427 aaKnown RBP19.7■□□□□ 0.74
CAPN3-209ENST00000466222 GNL1P36915 607 aaPredicted RBP19.7■□□□□ 0.74
CAPN3-209ENST00000466222 PBKQ96KB5 322 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 RUFY1Q96T51 708 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 NT5C1AQ9BXI3 368 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 THAP2Q9H0W7 228 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 INTUQ9ULD6 942 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 CITO14578 2027 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 UNGP13051 313 aaPredicted RBP19.7■□□□□ 0.74
CAPN3-209ENST00000466222 WDR5P61964 334 aaKnown RBP19.7■□□□□ 0.74
CAPN3-209ENST00000466222 CLEC16AQ2KHT3 1053 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 KIAA0319Q5VV43 1072 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 NAA35Q5VZE5 725 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 LLGL2Q6P1M3 1020 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 DENND1BQ6P3S1 775 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 LRRC31Q6UY01 552 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 PHLDB2Q86SQ0 1253 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 MREGQ8N565 214 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 WDTC1Q8N5D0 677 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 ARHGEF26Q96DR7 871 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 DDX27Q96GQ7 796 aaKnown RBP19.7■□□□□ 0.74
CAPN3-209ENST00000466222 FAM49BQ9NUQ9 324 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 KANSL3Q9P2N6 904 aa19.7■□□□□ 0.74
CAPN3-209ENST00000466222 MYH10P35580 1976 aa19.69■□□□□ 0.74
CAPN3-209ENST00000466222 ATMINO43313 823 aaPredicted RBP19.69■□□□□ 0.74
CAPN3-209ENST00000466222 BCAR1P56945 870 aa19.69■□□□□ 0.74
CAPN3-209ENST00000466222 PSMC1P62191 440 aaKnown RBP19.69■□□□□ 0.74
CAPN3-209ENST00000466222 DCLRE1AQ6PJP8 1040 aa19.69■□□□□ 0.74
CAPN3-209ENST00000466222 SRLQ86TD4 932 aa19.69■□□□□ 0.74
CAPN3-209ENST00000466222 TMEM173Q86WV6 379 aaPredicted RBP19.69■□□□□ 0.74
CAPN3-209ENST00000466222 TOP1MTQ969P6 601 aa19.69■□□□□ 0.74
CAPN3-209ENST00000466222 GDAP1L1Q96MZ0 367 aa19.69■□□□□ 0.74
CAPN3-209ENST00000466222 FAM193BQ96PV7 902 aaPredicted RBP19.69■□□□□ 0.74
CAPN3-209ENST00000466222 PSMB7Q99436 277 aa19.69■□□□□ 0.74
CAPN3-209ENST00000466222 ISCUQ9H1K1 167 aa19.69■□□□□ 0.74
CAPN3-209ENST00000466222 PRKAG2Q9UGJ0 569 aa19.69■□□□□ 0.74
CAPN3-209ENST00000466222 ZMYND8Q9ULU4 1186 aaPredicted RBP19.69■□□□□ 0.74
CAPN3-209ENST00000466222 STXBP5LQ9Y2K9 1186 aa19.69■□□□□ 0.74
CAPN3-209ENST00000466222 A0A0A6YYK5 440 aaPredicted RBP19.68■□□□□ 0.74
CAPN3-209ENST00000466222 ABHD14A-ACY1A0A1B0GW23 586 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 NRP1O14786 923 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 DGKIO75912 1065 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 CYP1A1P04798 512 aaPredicted RBP19.68■□□□□ 0.74
CAPN3-209ENST00000466222 PAEPP09466 180 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 H2AFZP0C0S5 128 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 ZNF365Q70YC5 407 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 H2AFVQ71UI9 128 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 ZNF677Q86XU0 584 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 TOP6BLQ8N6T0 577 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 RSPH1Q8WYR4 309 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 SNX25Q9H3E2 840 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 IL23AQ9NPF7 189 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 RALGAPA2Q2PPJ7 1873 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 TRIP11Q15643 1979 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 SLC11A1P49279 550 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 SLC7A5Q01650 507 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 RPS6KA1Q15418 735 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 PPP1R26Q5T8A7 1209 aaPredicted RBP19.68■□□□□ 0.74
CAPN3-209ENST00000466222 C1orf131Q8NDD1 294 aaKnown RBP19.68■□□□□ 0.74
CAPN3-209ENST00000466222 UBA3Q8TBC4 463 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 UROC1Q96N76 676 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 CYTH4Q9UIA0 394 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 SCN1AP35498 2009 aa19.68■□□□□ 0.74
CAPN3-209ENST00000466222 O00370 1275 aa19.67■□□□□ 0.74
CAPN3-209ENST00000466222 GABRDO14764 452 aa19.67■□□□□ 0.74
CAPN3-209ENST00000466222 FTCDO95954 541 aa19.67■□□□□ 0.74
CAPN3-209ENST00000466222 NOMO3P69849 1222 aa19.67■□□□□ 0.74
CAPN3-209ENST00000466222 ACAD10Q6JQN1 1059 aa19.67■□□□□ 0.74
CAPN3-209ENST00000466222 RIN2Q8WYP3 895 aaPredicted RBP19.67■□□□□ 0.74
CAPN3-209ENST00000466222 B3GALT6Q96L58 329 aa19.67■□□□□ 0.74
CAPN3-209ENST00000466222 DDX43Q9NXZ2 648 aaKnown RBP19.67■□□□□ 0.74
CAPN3-209ENST00000466222 SMARCAL1Q9NZC9 954 aa19.67■□□□□ 0.74
CAPN3-209ENST00000466222 EHD2Q9NZN4 543 aa19.67■□□□□ 0.74
CAPN3-209ENST00000466222 CXXC1Q9P0U4 656 aaPredicted RBP19.67■□□□□ 0.74
CAPN3-209ENST00000466222 TMEM59LQ9UK28 342 aa19.67■□□□□ 0.74
CAPN3-209ENST00000466222 RTN2O75298 545 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 MICAL2O94851 1124 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 HEXIM1O94992 359 aaKnown RBP19.66■□□□□ 0.74
CAPN3-209ENST00000466222 GZMAP12544 262 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 CCDC130P13994 396 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 WARSP23381 471 aaKnown RBP19.66■□□□□ 0.74
CAPN3-209ENST00000466222 SLC20A2Q08357 652 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 BCL7CQ8WUZ0 217 aaPredicted RBP19.66■□□□□ 0.74
CAPN3-209ENST00000466222 MS4A14Q96JA4 679 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms